Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409163
Help
Entry
139409163 CDS
T10872
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related-like isoform X1
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139409163
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
139409163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4763
PI3K_P85_iSH2
DUF4164
MlaC
Motif
Other DBs
NCBI-GeneID:
139409163
NCBI-ProteinID:
XP_071010043
LinkDB
All DBs
Position
5:62311180..62319392
Genome browser
AA seq
324 aa
AA seq
DB search
MFLLAYLITSLTHFTSCSDIMGGVKQEQNDGPPPRGMPSSDAAHEEHIRSLSVQPVKKRG
WPKGKKRKKVLPNGPKAPVTGYVRFLNERREQIRAKYPDLPFPEITKRLGAEWSCLAPND
KQRFLDEAEREKLQYARELREYQQSEAYQITSAKIQDKKVKREESPSVIINANSSGSAAL
KGSDYLSNRFDVPIFTEEFLDQNKAREAELRRLRKANVEFEEQNAVLQKHIADMYSAKER
LEAELGQDELRTQALHRHLLAIKHTLVSSLSTVALPGTGETPSLGTLDSYLSRLSGTLES
NPHEHRALLTQLRDVLSHLDSEKL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgttccttttggcatatttaatcacatctctgacgcattttacgtcatgttcagatatc
atgggaggtgtgaagcaggagcagaatgatggaccaccaccaagaggcatgccgtcctct
gatgcagcacacgaagagcatatccgttctctttctgtacagcctgtgaagaagaggggt
tggccaaagggtaagaagaggaagaaggttctgcccaacggtcccaaggcaccagtgact
ggatatgtgcgctttctgaatgaacgacgagagcagatccgtgccaagtaccctgacctg
ccctttccagaaattaccaagaggttgggcgcagagtggagctgcttagcacctaatgac
aaacagcgcttcctggatgaggcggagcgagaaaagctgcagtatgcccgggagctgaga
gaataccaacagagtgaggcctatcagatcaccagtgccaagatccaggacaagaaggtc
aagagagaggaatctccatctgtcattatcaatgccaacagttctggatcggctgctctg
aagggttcagactacctgtccaacagatttgatgttccaatatttacagaggagttcctg
gaccagaacaaggcccgggaagcagagctgcggcgtctacgcaaagccaacgttgagttt
gaggagcagaatgccgtgctgcagaagcacatagcagacatgtacagcgccaaagagagg
ctggaagctgaactggggcaggatgagctccggacgcaggccttacacaggcacctgctg
gccatcaaacacaccctcgtcagcagtctgtccaccgtggccctgccaggcacaggtgag
accccctctcttggtaccctggactcttacctaagtcgcctgagtggtactctggagagc
aaccctcatgagcaccgtgccttgctgactcagcttcgcgatgtcctttctcacctggac
agtgagaagctatga
DBGET
integrated database retrieval system
