Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409209
Help
Entry
139409209 CDS
T10872
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139409209
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139409209
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
139409209
Nuclear receptors [BR:
ocla03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
139409209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
139409209
NCBI-ProteinID:
XP_071010144
LinkDB
All DBs
Position
5:complement(64135028..64152089)
Genome browser
AA seq
474 aa
AA seq
DB search
MSSSLLPAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLID
RTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQASQELAAAREVGAE
VEGHGRAYSRGSSAALSDLDDIATLPDGLLFDLPLTPEGAEREYCNLEMIGGSSSSSQSS
PEQNGLDFRDGNHHIKHEYQLLHESSLFTHTLLNTLPEGFSILEIERITASVVKSHMETS
QHGSEELKRLVWSLYTPEETRSFQSKSAEVMWQHCAIHLTNAIQYVVEFAKRITGFLDLC
QNDQIILLKAGCLDVLLIRMCRAYNPINNTVLFDGKFASAQTFKALGCDDLVGAVFDLAK
SLSRIQLSEEEMALFSAAVLLSPDRPWLKDTQQVQKLQEKVYLSLQHCLHRCGSSEEKLA
KMVSKLPMMKSICNLHIDKLKFFRLLHPETAYNFPPLYREVFSSEITFPDSTMG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctctctccttccagcacaaattgaagtaataccctgcaagatctgtggggac
aagtcatcagggatccactatggcgtaatcacctgtgaaggctgcaagggtttcttcaga
cgcagccagcagaacaatgctatgtactcctgctcccggcagaggaactgtctgattgac
cgcaccaatcggaatcgctgccaacattgccggctgcagaagtgcctggccctgggcatg
agccgtgatgctgtaaagtttggccgcatgtccaaaaagcagagagacagcctatacgct
gaggtccagaagcaccaggcatcccaggagttagctgccgcccgtgaggtgggagccgag
gtcgaaggtcatggccgggcatacagcagaggctccagtgctgccctcagcgaccttgac
gacatcgccactctgccggatggcctgctgttcgacctacccctgacaccagagggcgcc
gaaagagagtactgcaatctggagatgatagggggcagcagctcctcctctcagagttcg
cccgaacagaacggactggacttcagagatggcaaccaccacatcaagcacgagtaccag
ctgctgcatgagtccagcctgttcacacacacactgctcaacactttacccgaggggttc
tcaatacttgagatcgagcgtattactgctagtgtggtaaagtctcacatggagaccagt
cagcacggcagtgaggagctgaagagacttgtctggtccctgtacacccctgaggagaca
cgcagcttccagagcaagtctgcggaagtcatgtggcagcattgtgccatccacctcacc
aatgccatccagtacgtggtggagtttgccaagcgcatcactggattcctggatctttgt
cagaacgaccagatcattcttctcaaagcaggatgtctggatgtgcttctgattcgcatg
tgtcgtgcctacaaccccatcaacaacactgttctgtttgatggcaagtttgccagtgca
cagaccttcaaagctcttggttgtgatgaccttgtgggtgccgtgtttgacctggccaag
agccttagccgtatacagctctctgaagaggaaatggctctgttcagtgctgctgttctc
ctgtcaccagaccgaccatggttgaaagacacccaacaggtgcagaagcttcaagagaaa
gtatatctctctctgcagcattgtctacatagatgtggctcatcggaggagaaactggca
aagatggtgtccaagcttcccatgatgaagtccatctgcaatctccacattgacaagctc
aagtttttccgtctcctccacccagagacggcatacaatttcccccctctgtaccgcgag
gtgttcagcagtgaaatcaccttcccagactccacaatgggctaa
DBGET
integrated database retrieval system
