Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409211
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Entry
139409211 CDS
T10872
Name
(RefSeq) semaphorin-6B isoform X1
KO
K06842
semaphorin 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
139409211
NCBI-ProteinID:
XP_071010146
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Position
5:complement(64192054..64329735)
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AA seq
861 aa
AA seq
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MSTLAPPFFLLFWLLRLASTAFPEEPGPLNFISIEVVHRYPVFLGRPHRSSLRQEPLHIQ
RVLKVNRTLYIGARDDLFRVELDNVAGDEMFYSKKRTWESNKNDIRTCRMKGKHEDECRN
FMKVLLSRQGGLFVCGTNAFNPLCANYTGDTLEMVGETVSGMARCPYDPKHANVALFAEG
NLFTATVTDFLAIDAVIYRSLGDSPALRTVKHDSKWFREPYFVSSVEWGPHIYFFFREMA
MEFNYLEKVRDKMVQVSRVSRVCKGDLGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNL
LHSTSPVIRMHGRDIILGVFSTPANSIPGSAVCAFDMEQLAGVFDGRFKEQKSPESIWTP
VPDELVPKPRPGGCAVQGSRFNSSNGFPDEMLNFVKTHPLMDEAVPSLGQRPWIVRTMVR
YQLNKMVMDTEAGPYRNRTVLFLGSSRGTILKFLIVPNRDNTVSSSNVFLEELEGFIPDK
CGEDSPQARQLLSLTLDWVSQSLLLAFPSCVVRVPVARCQLYSRCMKNCIASRDPYCGWT
RGSTCSFLRPGTRLPFEQDIEHGNVSHLGDCDGLLQESFIDEPDGLVSVNLLVVSAVSAF
ATGAVLSGLAVCWIMSHRHRTRGAGANRSRKGDKEQNMLGQGRSGSVMSVTRTSGSERPR
SHSQADNPFVMPNGWPKGEMDPGLPTPEQTPLQQKRPPPSMRDVDWEQSQTFLTSVGMPC
PANSVIYLSSKFLQERGGRHEGPGDVGPPNTERTRYLVLASNREPHGGQPRTTLRNSAGE
YNYPATPQDSPDRRRVVSAPSTQMDFGEPPRWTHEGLNYNSNNGAPYPSQRPGLIRANHH
GLADFSHLMGKSVGEPTPSGQ
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccctggcaccacccttcttcctgctgttctggctcctccgattggccagcact
gcgtttccggaggaaccggggcctctgaactttatctccattgaagtggttcaccggtac
ccagtgtttctgggtcggccacatcgttcatccctgagacaggagccactgcatattcag
agagtcctcaaggtgaaccggaccctctacattggagccagagatgaccttttccgcgtg
gagctggacaatgtggcgggagacgagatgttctacagtaagaagagaacatgggagtcc
aacaaaaatgacatcaggacctgccgaatgaagggcaagcacgaggacgagtgtcggaac
ttcatgaaggttttgctgagtcgacaaggaggtctgtttgtatgtgggaccaatgccttc
aatccgctgtgtgccaactatactggagacactctggagatggtgggagagacagtcagt
gggatggcccgctgtccctatgatcctaaacacgccaacgtggctctgttcgcagagggg
aatctgtttacggccactgtgacggacttcctggcgatagacgctgtgatctaccgtagc
ctgggggacagtcctgcactccgcacagtcaaacacgactccaaatggttcagagagccc
tattttgtcagttcagtggaatggggtcctcacatctacttcttcttcagagagatggcc
atggagtttaactatctggagaaggtacgagacaaaatggtacaggtgtctcgggtgtct
cgggtgtgtaagggggacctgggtggttctcagagggtgttggagaagcagtggacgtcg
ttcctgaaggccagactgaactgctccgtccctggagactcccacttctacttcaatctg
ctccactccaccagccctgtcatcaggatgcacggcagggacatcatcctgggagtcttc
tccacccccgccaacagtatccctggttcggctgtgtgtgcgttcgacatggagcagctg
gctggggtgtttgatgggagattcaaggagcagaaatcacctgagtctatatggacccct
gttcctgacgagctcgttcccaaaccaaggccagggggctgtgctgttcagggctccagg
ttcaactcatccaatggtttccctgatgagatgctgaactttgtgaagacccaccccctg
atggacgaggccgtgccctcactgggacagaggccctggatcgtcaggaccatggtcagg
taccagctgaataagatggtgatggacacggaggctggcccctacagaaaccgcacagtg
ctcttcctgggctccagccgggggaccatcctcaagttcctgatcgtccccaaccgggac
aacaccgtgtccagcagcaatgtcttcctggaggagctggagggcttcatccctgacaag
tgtggggaggactctccgcaggcgaggcagttgttgtccctgactctggactgggtgagc
cagtctctgctgctggccttcccctcttgtgtggtcagggtccctgtggcacgatgccag
ctctactcacgctgcatgaagaactgcattgcctccagggacccctactgtggctggacc
agaggaagcacctgctccttcctcaggcccgggaccagactgccgttcgagcaggacata
gaacacgggaacgtgtcccacttgggcgactgtgatggtctcctgcaggagtctttcatt
gacgagccagatggtctggtgtcagtcaacctgctggttgtgtctgcagtctcagctttc
gccacgggggcggtgctgtcgggcttggctgtctgctggatcatgagtcatcgccaccgc
acacgaggggcaggagccaacaggagccgtaaaggggacaaggagcagaacatgctgggt
cagggccggagcggctcagtgatgagcgtgacacgtaccagtggcagcgagagaccccgg
tcacattctcaggcagacaacccgttcgtaatgcccaacggctggcctaaaggagagatg
gatccaggcctacctactccagaacagacccccctgcagcagaaaaggcctccacccagc
atgagagatgtagactgggaacagagccagaccttcctcacctcagtgggcatgccctgc
ccagccaactccgtcatctacctgagctccaagttcctgcaggagagaggtggcaggcac
gagggcccaggggatgtggggccccccaacacagagcgaacacgttacctggtcctcgcc
agcaaccgggagccacatgggggacaacccaggaccaccctgaggaactctgcaggtgaa
tacaactacccagccacaccacaggactccccagaccgcaggagggtggtctcagccccc
agcacccagatggactttggggagcctccccgctggactcacgagggactcaactataac
agcaataacggagcgccctacccctcccagcgcccgggcctgatccgggccaaccaccac
ggccttgccgacttcagtcacctaatgggaaagagcgtgggcgagcctacccctagtggc
cagtga
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