Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409220
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Entry
139409220 CDS
T10872
Name
(RefSeq) vesicle-trafficking protein SEC22b-B
KO
K08517
vesicle transport protein SEC22
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
ocla04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139409220
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139409220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139409220
Membrane trafficking [BR:
ocla04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
139409220
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GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
139409220
NCBI-ProteinID:
XP_071010170
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Position
5:64576426..64580073
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AA seq
215 aa
AA seq
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MVLLTMIARLADGLPLAASMQEDEQLGRDLQQYQSQAKQLFRKLNDQSPTRCTLEAGSMS
FHYVIEKGVVYLVLSEASFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFDTYIQ
KTKKSYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKY
RSDAKYLNTRSTYAKLAAGGVFFIMLIVYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgacaatgatcgctcggttggcggatggactgccacttgccgcctcaatg
caggaggacgaacagttgggtcgggacctgcaacagtaccagagccaggctaaacagctg
ttcaggaaactcaatgaccagagtcccacacgttgcacattagaggctggctccatgtcc
tttcactacgtcatagaaaaaggagtggtctacctagtgctgtctgaagcaagctttccc
aaaaaacttgcctttgcttacctggaagacctgcaggcagagttccatgaacagcacggg
aagaaggtccccactgtgtcccggccgtactccttcattgagtttgacacctacattcag
aagaccaagaagtcctacatagacagccgagcccgtaggaacctgggcagcatcaacaca
gagctgcaggacgtccagaggatcatggtggccaacattgaggaagtattgcagcgaggg
gaggccttgtctgctctggactccaaggccagtaatctgtccagcctgtcaaagaagtac
agaagcgatgccaagtacctgaacactcgttccacctatgctaagctggctgcaggcggg
gtcttcttcattatgcttatcgtctacgtccgcttctggtggctctga
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