Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409225
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Entry
139409225 CDS
T10872
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform X1
KO
K08625
a disintegrin and metalloproteinase with thrombospondin motifs 10 [EC:3.4.24.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139409225
Peptidases and inhibitors [BR:
ocla01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
139409225
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
TSP_1
Pep_M12B_propep
ADAMTS_CR_2
Reprolysin_5
Reprolysin_3
ADAMTS_CR_3
PLAC
Reprolysin_2
TSP1_spondin
TSP1_CCN
Reprolysin_4
DUF4953
Peptidase_M57
Motif
Other DBs
NCBI-GeneID:
139409225
NCBI-ProteinID:
XP_071010178
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Position
5:complement(65161692..65215294)
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AA seq
1121 aa
AA seq
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METVWRILACIVVIIVMVATEVAESQTAEKLTQSHATFLSSLGQYEIAIPVRVGPQGETL
HTGDGGADRPNHYRRSRRSAEDQQQDLSQLYYQLSTPTTNFLLNLTLQGGLLSRQFRVEY
WRRGRLAWSHPYALQCLYVGHLQDQPHSSKVALSNCNGLQGVIVAGGEEYIIEPLTPHEN
LTRAERGESRPHVVYKRSSLRHQYMDQSCGVIDEKPGKGMAWWQRTLKTPPNPIGRGQLP
LKRSVSRERYVETLVVADKMMVGYHGRRDIEQYILAVMNIVAKLFQDSSLGNAVNIVVTR
LILLMEDQPTLEINHHAGKSLDSFCKWQKSIQNRNGNGNAIPDNGIAHHDTAVLITRYDI
CIYKNKPCGTLGLAPVGGMCEPERSCSINEDIGLATAFTIAHEIGHTFGMNHDGVGNACG
SRSQETAKLMAAHITMKTNPFVWSACSRDYITNFLDSGMGSCLNNIPPKQEFVYPTTAPG
QAYDADEQCRFQYGVKSRQCKYGEVCSELWCMSKSNRCITSSIPAAEGTICQTNTIEKGW
CYKRVCVAYGTRPEGVDGGWGLWTPWEECSRTCGGGVSSSIRHCDSPRPTIGGKYCLGER
KRFRSCNIDECPAGSQDFREIQCADFDNVPFRGKFYTWQPYRGGAYSGVKSCSLNCLAEG
YNFYTERAPAVVDGTPCRDDSLDVCVNGECKHVGCDRILGSDVREDRCRICGGDGSNCEA
IEGVFNDSLPEGGYEEVVRIPKGSTFIHIQELNISLNYLVLKSKGDQYFINGKLTIDTPR
RFDITGTTFHYRRPTDEPETLEALGPTNMTLIVMVLVRDENPGIHYRFNPPVNRDPLTGY
AWHYTSWSRCSALCAGGAQIQQVVCKKQADHSVVYNHFCDKKSKPKDKKRGCNSEPCSPS
WGSGEWSECSRSCNGGLRTREVLCKRKISPTEEKVQDDGACTPPGPPLTEPCNNHTCPPE
WMALNWSECNPSCGPGFRHRVLLCKRGESGGTLPESQCPKYGRPTTRVRCNLQRCPPPLW
VTGPWGECSANCGLGQEMRSVQCLVHTGQPSNECPDLLRPAAMQQCKSKCDLSSLPMDIP
EGDPEECKDVNTVAYCPLVLRFKFCSRPYFRQMCCKTCQGH
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggtatggaggatcttggcctgcattgttgtcatcatcgtcatggttgccacc
gaggtcgcagaaagtcagactgctgaaaagttgacccagtcacacgctacgttcctgtct
agcctgggccagtatgagattgccatcccggttcgcgtggggccgcagggcgagaccctg
cacacaggggatgggggtgcagacaggcccaaccactatcggcggagccgccgtagtgct
gaggaccagcaacaggacctgtcccagctgtactaccagctctctacccccacaaccaac
tttctcctcaacctgaccctgcaggggggcctgctgtcccgtcagttccgtgtagagtac
tggaggagggggcgtctggcctggagccacccttacgcccttcagtgtctctatgtaggc
catctgcaggatcagccccactctagcaaggtggctctcagcaactgtaatggcctgcag
ggggtgatcgtggcaggaggtgaggagtatatcatcgagcctctgaccccgcacgaaaac
ctcacgagggcggagaggggggagagccgcccccatgtggtctacaagaggtcatctctt
cgccaccagtacatggaccaatcctgtggggtcatcgatgagaagccagggaaaggtatg
gcctggtggcagaggactctgaagactcctcccaaccccatcggccgaggccagctgcct
ctgaagaggtctgtgagcagagagcgctacgtagaaacactggtggtggccgacaagatg
atggtggggtaccacggccgccgggacattgagcagtacatcctggctgtcatgaatatt
gttgccaaactgttccaggattctagcctggggaatgcagtgaacatcgtggtgacccgt
ctcatcctgctcatggaggaccagccgactctagagatcaaccaccatgcagggaagtcc
ctggacagcttctgtaagtggcagaaatccatccagaaccggaatggcaatgggaacgcc
atcccagacaacggcatcgctcaccacgacactgccgtgctcatcaccaggtacgacatc
tgcatctacaagaacaagccatgtggaaccctaggtctagctccagtgggggggatgtgt
gagccagagaggagctgcagtatcaacgaagatatcgggctggccacagctttcaccatc
gcccacgagataggacacacgtttgggatgaaccatgacggagtgggcaacgcctgtggc
tcccgcagtcaggagacagccaagctgatggctgcacacatcaccatgaagaccaacccc
ttcgtctggtctgcctgcagccgagactacatcaccaacttcctggactcaggtatgggt
tcatgcctcaacaacatcccaccgaagcaggagtttgtgtaccccaccacggcccccggc
caggcctacgatgcagacgagcagtgccgcttccagtacggagtgaagtctcggcagtgt
aaatacggggaagtctgcagtgagctgtggtgcatgagcaagagcaaccgctgcatcacc
agcagcatacccgctgcagaaggaaccatctgtcaaaccaataccatagagaaagggtgg
tgctataagagggtgtgtgtggcctacgggacccggccagagggcgtggacggcgggtgg
ggtctctggaccccctgggaggagtgcagccgtacctgtgggggaggagtgtcctcctcc
atccgccactgtgacagccccaggccaacgattggtggaaagtattgtctgggagagagg
aagcgcttcagatcgtgcaatattgatgagtgtcctgcaggctctcaggatttccgggag
attcagtgcgccgatttcgacaacgttcctttccgggggaaattctacacctggcaaccc
tacagaggaggtgcgtacagtggagtgaagtcctgctctctgaactgcctggcggaggga
tataacttctacacagagcgtgctccggctgtggtggacgggaccccatgtcgggacgac
tctctggatgtctgtgtgaatggagagtgcaagcacgtgggctgtgaccggatcctgggc
tcggatgtgcgggaggaccgctgccgtatctgcgggggtgacgggagcaactgtgaggcc
atagagggcgtcttcaatgactccttgcctgaaggaggttatgaagaggtggtcagaatc
cccaaaggatctaccttcattcatattcaggagctcaacatctccctcaactacctagtg
ctgaagagtaaaggggaccagtacttcatcaatgggaagctgaccatcgacacccctcgt
aggttcgacatcacagggaccaccttccactaccgccgacccactgatgagcctgagacc
ctggaggccctggggcccaccaacatgaccctcatcgtcatggtgctggtgagggacgag
aacccagggatccactaccgcttcaaccctccagtcaacagagaccctctgactggatac
gcctggcactacacatcctggtcccgctgctccgcactctgcgctgggggtgctcagatc
cagcaggtcgtgtgtaagaagcaagctgatcactccgtggtctacaaccacttctgtgac
aagaagagcaaacccaaagacaagaagcgaggctgcaactctgagccatgctccccaagc
tgggggtctggggagtggtctgagtgcagtcgcagctgtaacgggggcctgaggaccaga
gaggtgctgtgtaagaggaagatctctcctacagaggagaaggtgcaggacgacggcgcc
tgtacccccccaggaccacccctcactgagccctgcaacaaccacacctgccccccagag
tggatggccctgaactggtcagagtgtaatcccagctgtggtccagggttcaggcaccgt
gtccttctgtgtaagaggggggagagtggaggcacactgccagagtcccagtgtcccaag
tatgggcgtcccaccaccagggtgcgctgtaacctgcagcgctgcccaccccccttgtgg
gtcacagggccctggggagagtgctcagccaattgtggtctgggtcaggagatgcgctct
gtgcagtgtcttgtacacaccggccagccgtccaatgagtgcccagacctcctgcgcccg
gcagccatgcagcagtgcaagagcaaatgtgacctcagcagcctacccatggacatccct
gagggtgaccctgaagagtgtaaagatgtgaacacagtggcgtactgccccctagtgctc
aggtttaagttctgcagccgcccctacttcagacagatgtgctgtaagacttgccaagga
cattga
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