Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409283
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Entry
139409283 CDS
T10872
Name
(RefSeq) paired amphipathic helix protein Sin3b-like isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
139409283
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
DUF5760
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
139409283
NCBI-ProteinID:
XP_071010300
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All DBs
Position
5:complement(68635316..68644972)
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AA seq
1221 aa
AA seq
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MAKIQAHSNPKQINQIQDKAYVVQKQVQQQHFQKLKVEDALSYLDQVKIRFGNDPGIYNK
FLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGVVFLQSPF
SAQVSPGQGKSIASPAVSATGSSVAEAGSAQSEAVASPESISSSSGPPEPPSRLSLPLPS
RESQSQPQSSSVSPPASEPSPVEFDSAISYVNKIKNRFLDHPEIYRSFLEILHTYQVHCV
INMKEQLEVKESRNRSSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFTGSSL
TGKDQLKRAEDEDMSKHSKKRSRPMLLPHMTPLLKKKMKFSCSQDQSFASVGKHGVLREF
TFFDKVRRFFKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSFLGD
KELSHSMSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTAICKEVLND
TWVSFPSWSEDSTFASSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRL
SPEDQDRFRLDDCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKAKE
EEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESVYDERQEQ
STEEGGVGQQGRDGSSAAVVSEPHMVFTYEDKQILEDAASLIIYHVKRQPTIHKDDKDHI
KRIIQHFVPDLFFSRRGELSETEEWTDEEAEVEEGGDRGGGGSSSITGAVAAPVGQPQQQ
QQLNGESRRRRCTSPQTAELGGASSHSLAPEGGEKVDLRDPEAEHQKDLDGVYNLFFVNN
NWYFFLRLHQTLCQRLLRVYRQAERQLLEHRAEQNRERLLMAEGRRDKASDLAMELRLKQ
PSEVELEEYYPAFLDMVRSLLDGNLESTQYEDTLREMFTIHAYIGFTIDKLIQNTIRQLQ
HLVSDEVCLQVAELYLAERKRGAAGGNLSSQCVRAAWETSYQWKSERVMAEENCFKVLFI
QNKGQVTLTIELLDTEEAQADDPLDVQCLSSYMEQFVGTESTLCSQTEGYFFKPVFLPRN
LRHFRRWQVRQVEAMRCRREWHRQLGVESAGSLDCRFKLNTHKMVFVMNSEDYMYRRGAL
VKARKSQHRVAVKQHERFDKWHQGWLAEHVPPAADRSVHDWLMGEEEEDMIPCKTTCLNT
QVKGLPVNRYQVHYSRKPPSP
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaattcaggcacacagcaacccgaaacaaataaaccaaattcaagacaaggcc
tatgttgtacaaaaacaagtgcaacaacagcactttcagaaactgaaggttgaagatgcc
ctatcatacctggaccaagtgaaaatacgatttgggaatgaccctggaatatataacaaa
tttcttgacataatgaaagaatttaaatcacaaagcattgacacaccaggtgttataaac
cgtgtgtctcagctcttccacggacacccggaccttgtcttaggattcaatgccttcctg
cccccaggctatcggatagagattcccaagaatggagtggttttccttcagtcacctttc
tctgcccaggtctccccaggccaggggaagagtattgcaagccctgctgtgagtgccact
ggctcatctgttgctgaagctgggtctgcccaaagtgaagctgtggcatcgcctgaaagc
atctcctcgtcctctggacccccagagccccccagtagactttccttgccactccccagc
agagagagccagtcccagccacagtcctcctcggtgtccccccctgcctcggagcccagc
ccagtagaatttgacagtgctatcagctatgtcaacaagatcaaaaaccgcttcttagac
catccagagatctacagatccttccttgagatactacacacttaccaggtacactgtgtc
atcaatatgaaggagcagcttgaagtcaaggagagccggaatcgtagtagtagtgggatg
acagaggatgaagttttctcaaaagtggccagcctcttcaaaggccaagaggacttactg
gctgagtttggacagttcttaccagatgctaagagatcattgttcactggcagctccctg
acagggaaagaccaactgaagagggcagaggatgaggatatgagcaaacatagcaagaag
agatcaaggcccatgctgctgccgcacatgacgccactgctcaagaaaaagatgaagttt
tcgtgctcccaagaccagtcctttgcctcagttgggaagcatggagtcttgcgggagttc
accttttttgacaaggttcgacgtttcttcaagagccaggaggtgtatgaaaacttcctc
cgctgcattgctttgtttaaccaggaagtggtttcgggagcagagctgctgcagcttgtc
accccctttttggggaagtttccagagttatatacccagttcaagtcatttctgggtgac
aaggagctctctcattcaatgtcgggcctgtcggaccgctacatggaagggggtgggggc
agggaggtcgactatgcatcttgcaagcgcctgggatccagctacagagcactacccaag
acttaccagcagcccaagtgcagcggccgcactgccatctgcaaagaggtgttgaatgac
acctgggtttccttcccctcatggtccgaggactctacgtttgcaagctctaagaaaacc
ccatatgaggagcagcttcatcgctgtgaggatgagaggtttgaattggatgtggtccta
gagacaaacctggccaccatccgggtcctggagagtgttcagaagaagctgtcccgtctg
tcgcccgaggaccaggaccgcttccgcctggacgactgtctgggtggcacctctgaggtc
atccagcgccgagccgtctaccgtatctatggcgacaaggcccctgagattatagagggt
ctgaagaggagccctgctactgctgtgcctgtggtgctcaagagattgaaagcgaaggag
gaggagtggagagaagcacagcagggcttcaacaagatctggagggagcagtatgagaag
gcctacctcaagtccctggaccaccagggggtcaacttcaagcaaaatgacatgaaggcc
ctccgatccaagagcctgctcaatgagattgaaagtgtttatgatgagcgtcaggagcag
agcacagaggaggggggcgtgggccagcaggggcgtgatgggagcagtgcggcagtggtc
agcgagccacacatggtgttcacctatgaggacaagcagatcctggaggacgccgcctct
ctcatcatctaccacgtcaaacgccagcccaccatccacaaggatgacaaggaccatatc
aagcgcatcatccagcactttgtccctgacctattcttctcccgccgcggcgagctcagt
gagacggaggagtggacggacgaggaggcagaggtggaggagggaggagaccggggaggt
ggtggtagcagcagcataacaggagcagtagcagcaccagttggccagccgcagcaacaa
cagcaactgaacggggagtcgaggcggcggcgctgcacctctcctcagacagcggagctg
ggtggcgcctcctctcacagcctggccccagaaggaggggagaaggtggacctgagagac
cctgaggcagagcaccagaaggatctggacggagtctacaacctgttcttcgtcaacaac
aactggtacttcttcctgcggctgcaccagaccctgtgccagcggctgctgagggtgtac
cggcaggcagaacggcagcttctggagcaccgggccgagcagaaccgtgagaggctgctg
atggcagagggtcgcagggataaggccagcgacctggccatggagctccgcctcaaacag
ccaagtgaggtggaactggaggagtactacccagcgtttttggacatggtgcgcagtctt
ctggatgggaacctggagtctacgcagtatgaggacacactgcgggaaatgttcaccatc
cacgcctacatcggcttcaccatcgacaagctcatccagaataccattagacagctgcag
cacctggtgagtgacgaggtgtgcctgcaggtggctgagctgtacctggctgagaggaag
aggggtgcagcgggggggaacctgtcgtcccagtgtgtgagagcagcctgggagaccagc
taccagtggaagtctgagagggtcatggctgaggagaactgcttcaaggtgttgttcatt
cagaacaaaggccaggtcaccttgaccattgagctgctggacacagaggaggcccaggcc
gatgatcccctggatgtgcagtgcctgtccagctatatggaacagtttgtagggacagag
tcaacgctttgctcgcagactgaaggctactttttcaaacctgtatttttgcccaggaac
ctgaggcacttcagacgctggcaggtgcgccaggtggaggcgatgcgctgcagacgggag
tggcacagacagctgggtgtggagagtgctggcagtctggactgccgcttcaaactcaac
acccacaagatggtgttcgtcatgaactctgaggactacatgtaccgccggggagcgctg
gtcaaagccaggaagtcccagcacagggtggctgtaaaacagcacgagcgctttgacaag
tggcaccagggctggctggcagagcacgtgcctccggcggccgatcgctcggtccacgac
tggctgatgggtgaggaggaagaggacatgatcccctgcaagaccacctgcctcaacaca
caggtcaaaggcctgcctgtcaacagataccaggtgcattacagtaggaaacctccctct
ccctag
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