Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409296
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Entry
139409296 CDS
T10872
Name
(RefSeq) calcium-activated potassium channel subunit beta-2 isoform X1
KO
K04938
potassium large conductance calcium-activated channel subfamily M beta member 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
139409296
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139409296
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
139409296
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Gene cluster
GFIT
Motif
Pfam:
CaKB
KcnmB2_inactiv
Motif
Other DBs
NCBI-GeneID:
139409296
NCBI-ProteinID:
XP_071010324
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Position
5:69844516..69871555
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AA seq
271 aa
AA seq
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MKQDSYARRHQGRVGWSQQPCVTPSVSGGGHRESSGRMFLWTGSKGAQGSGGERRTIYQK
VREYDVLDKRKTVTALKAGEDRAILLGLSMILFSVMMYFVLGITMVRSYSDSVWTEESSC
AVLNSTIVAEINCTYSCGSECWKSSKYPCLQVFVSLNTSGKVVRLSHNEEAQDTNPKCFY
VPKCRKDYNAMHTVIMNISERLKTQQQVLCYTDPGEQQESALLTRIYGRVAVFHSLFWPT
CTLIGGTIIIAMVKLTQYLSIMCEQVGRIKR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagacagttacgccagacgacatcaagggagagtggggtggtctcagcaaccc
tgtgtgacgccctctgtgagtggtggcgggcacagagagtcctcagggaggatgtttctc
tggacaggaagtaaaggagctcagggatcaggaggtgagagaaggactatttatcagaag
gttcgggagtatgacgtgctagacaagaggaagacagtgacagcactgaaggctggggaa
gacagagctattctcctcggactcagcatgatccttttctctgtgatgatgtactttgtg
ctgggcatcaccatggtgcgctcctactcagacagtgtgtggacagaggaatccagctgc
gctgtgctcaactccaccatcgtggcggagattaactgtacctacagctgcggctccgag
tgctggaaaagctccaagtacccgtgtctacaggtgtttgtcagtctcaacacatctggg
aaggttgtccgactctcccacaacgaggaggcacaggacaccaacccaaagtgcttctat
gtgcccaaatgtcggaaggactacaacgcgatgcacaccgtaatcatgaacatctcggag
cgtctgaaaacacagcagcaggtgttgtgttacacggacccaggtgaacagcaggaaagt
gctctactgacacgcatctatggccgagtggcagtgttccattcactcttctggcccacc
tgcaccctcattggtggaaccatcatcattgccatggtgaagctcacccagtacctgtcc
atcatgtgtgaacaggtgggcaggatcaaaaggtga
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