Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409330
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Entry
139409330 CDS
T10872
Name
(RefSeq) 5'-AMP-activated protein kinase catalytic subunit alpha-2-like isoform X1
KO
K07198
5'-AMP-activated protein kinase, catalytic alpha subunit [EC:
2.7.11.31
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04068
FoxO signaling pathway
ocla04140
Autophagy - animal
ocla04150
mTOR signaling pathway
ocla04371
Apelin signaling pathway
ocla04530
Tight junction
ocla04910
Insulin signaling pathway
ocla04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
139409330
04068 FoxO signaling pathway
139409330
04150 mTOR signaling pathway
139409330
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139409330
09144 Cellular community - eukaryotes
04530 Tight junction
139409330
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
139409330
04920 Adipocytokine signaling pathway
139409330
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocla01001
]
139409330
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139409330
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139409330
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.31 [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase
139409330
Protein kinases [BR:
ocla01001
]
Serine/threonine kinases: CAMK group
CAMKL family
139409330
Membrane trafficking [BR:
ocla04131
]
Autophagy
Other autophagy associated proteins
Others
139409330
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
139409330
Mitophagy factors
Other mitophagy factors
139409330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
AMPK_alpha_AID
AdenylateSensor
ABC1
Kinase-like
RIO1
Kdo
APH
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
139409330
NCBI-ProteinID:
XP_071010408
LinkDB
All DBs
Position
5:complement(71633074..71650085)
Genome browser
AA seq
559 aa
AA seq
DB search
MAERQQKHEGGRVKIGHYLLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVV
GKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEDKEARR
LFQQIISGVDYCHRHMVVHRDLKPENVLLDHSKNAKIADFGLSNMMSDGEFLRTSCGSPN
YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYMPEYLT
RPVASLLLLMLQVDPLKRATIKDIREHEWFKQDLPGYLFPEDLSYDSTVLDEEAVREVCD
KFESTESEVMSSLYSGDPQDQLAVAYHLIIDNRRIMTQASEFYLASSPPQGSFMEDGMPL
PPGVKPHPERMPPLLIDSPKARCPLDALNTTRAKPLAVKKAKWHLGIRSQSRPYDIMAEV
YRAMRQLQYDWKVVNPYHLRVRSKNPVTDNLVKMSLQLYQVDNRSYLLDFKSIDDDIMEA
VGFKSGSSTPQRSGSTAGLHRPRLSVDSALPAVDLPQLSSSLPGSLCTSAALITSTPHQG
SHTMDFFEMCASLITTLAR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacgacagcagaaacacgaaggcggccgagtgaagatcggacattatcttctc
ggagacactctgggcgtcggcaccttcggcaaagtaaagattggagagcaccagttgaca
ggtcataaggtggcagtgaagatcctgaacagacagaaaatcaggagtctggacgtggtg
ggcaagatcaaacgagaaatacagaacctcaaactattcagacaccctcatatcatcaaa
ctgtaccaggtgatcagtacgcctacagatttcttcatggtgatggagtatgtctcagga
ggagagctgtttgactacatctgcaaacacggacgggtagaagacaaagaggctcgtcgg
ttgttccaacagatcatctcaggggtagactactgccacagacacatggtggtgcacaga
gacctcaaacctgagaatgttctgctggaccattccaagaacgccaagatagctgatttt
gggttgtcaaacatgatgtcagatggggagttcctgaggaccagctgtggatctcccaac
tacgctgctcctgaagtcatctctggaaggttatatgctggccctgaagtggatatatgg
agctgtggtgtgatcctgtatgcgttgctgtgtgggactctaccctttgatgacgaacat
gttcccacgctgtttaagaagatcagagggggcgtgttctatatgccagaatacctcact
cgccccgtcgcctccctgctgctgctcatgctgcaggttgacccattgaagagagccacc
attaaagacattagggaacatgagtggtttaagcaggacctgccaggctacctgtttcct
gaggacctgtcttatgactctacggttctggacgaggaggccgtcagggaggtgtgcgac
aagtttgagagcaccgagtctgaggtgatgtccagcctgtacagcggagacccccaggac
cagctggcggtagcataccatctaattatagataaccgtcgtatcatgacccaggccagt
gagttctacctggcctccagccctccccagggctccttcatggaggatggcatgcccctg
cctcccggggtcaaaccacacccagagaggatgccccccctgctgatagacagccctaag
gcacgctgcccgctggatgccctcaacaccaccagagccaaacccctggcagtgaagaaa
gccaagtggcacctgggcatcaggagtcagagcagaccctatgacatcatggctgaggtc
tacagggctatgagacagctacagtatgactggaaggtggtgaacccctaccacctgcgt
gttcggagtaagaacccagtaacagacaacctggtgaagatgagtctccagctgtaccag
gtggacaacagatcctacctgctggacttcaagagcatcgatgatgacatcatggaggca
gtaggatttaagtcaggttcttccacccctcagaggtcaggctccactgcagggctccat
agacccagactcagtgtggactcagccttacctgccgtggatctcccccagctcagctcc
tccctgcctgggtcactgtgcaccagcgctgccctcatcacctccaccccgcaccagggc
agccacaccatggacttctttgagatgtgtgccagtctcatcaccacactggcccgctag
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