Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409339
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Entry
139409339 CDS
T10872
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139409339
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139409339
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139409339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139409339
NCBI-ProteinID:
XP_071010438
LinkDB
All DBs
Position
5:71795063..71838345
Genome browser
AA seq
2618 aa
AA seq
DB search
METEEEQHMTTLLCMGFPDPVAIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGPCGDAETTGRTGTGGFDPPPAYHDVVESERSNDENGNCSGGSMEFPTTNLYELESRVF
TDHWSIPYKREESLGRCLVAATCLAKHGLADADENCKRFMDRCMHEAFKKLLTSSAVHKW
GTEIHEGIYNMLMLLVELVAERVKQEPIPVGLMGVLAMAFNPDNEYHFKNRMKACQRNWS
EVFGEEAMFAVSPSNNYQKEPHGWLVDLVNLFGEMGGFTAIQAKLNTEEIEIGCVSALVQ
PLAVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPELLSAIKLLCMRFQ
TALVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKTVKNAIDTDRLLDWL
VENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWMIQAGQSSTVIENIHTI
MAAAAVKFNFEQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLEVLW
ELAHLPTLPTSLVQQASEEHLAILTDAYAVKETVKRCYIIKCIEDIKKTQTEEEGKTSDI
QTSFLTGSWGKKKAKENSLAKSSQQGSPQAVWVVPALRQLHEITRSFIKQTYQKQDKQSI
IQDLKKNFEIVKLITGSLVVCHRLAVSAAGNNGLTGHTLVDGRYTYQEYLDGHLRFLAFF
LQEASLYLVWNRAKELWDCLVSGPEVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLAGMDFIWRIAMETPDEEI
ANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATTMPTVATSVQSPSRSTKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFNGH
PVSLHVTYESTKDTFTLEAHSNETIGSIRWKIAEHLNCPVDNVQIFANDSVLTMNRDQKL
LSQLGFSDEQSLTVKSSGTGTPSGGSSESSVSASSSSSAVFNSAYAMEQEKSLPGVVMAL
VCNVFEMLYQLANLDEPRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFTL
GQGSGSRSPSLGSKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSDDEM
AKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQSMP
SLLDDDVIREGDTLSSRPFRNAGRPGRQLSLCGTPEKSSYRQMSLSERSSIRVEEIIPAA
RVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSPQPIRPEHSSLLPLVVRSRVSSTG
SNCSSSSEGEAPPTALHAGICVKQQSVSIKDCIIAREALSLLVTCLQLRTQQLGSFYNLP
CVSDFIIDILLGSASGEIRRVACDQLYTLSQSDTSAFPEIIKPNVFLLRVVLTSQLPLWS
PTSVMRGVNQRLLSQCTEYFELRCQLLDDLTSSEMEVLSVSAAAMLEDEISWLDNFEPSW
SSEMETSEADNILQAGHLRLIKTLLSLCGTEKEHLGPSLIQQLLDDFLFRASRIILNTSD
PASSSPPSHDFHPKCSTASSRLAAYEVLVMLADSSVANLQLITRELLSMHHQSDPSLSKE
FDFLPPVDSRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLAEAFLSIEDDTEQPDESVFC
QVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLKKIG
REQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEVLEG
TNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIRFPWVLNME
PYTVSGMARQDGGAEGGDGRGEAGGSPRKKVTISENYELVGVVVHSGQAHAGHYYSFIKD
RRSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYMLF
YQRISDQNSPVLPKKSRVSAMRQEAEDLTLSAPSSPDVSPQSSPRPPRANNDRLSVLTRL
VRKGEKKGLFVEKMPARIYQMVRDENLKFMKNRDVYNSDYFNFTLSLASVNATKLKHPAY
QAMARESLQLAVHFLFHTYLHTKKKLRVDTEEWMATVEVLLSKSSEACHWMAQYLVGPEG
REITKVCLLECGVREVRVVVAAILEKTLESALHFADSGLDSLTDALLSLLDKDVPENVKH
CNQYFSLFSNFAQRGSGPCQLLLKHSAYRRMLIFLLGPNRQNNQNRRWSPAQAREFLHLH
STLALMTLHSDLNTQHTHDQGVCKLNVSSVPASSTLLQLDTDIMASLFTHEGQPYLLEVM
FAVRELSGPLTVLIEMVTYCSFCNEPFSLGVLQLLKTQLETAPPHELKNVFQLLQELLVV
EDPLQTQRLKYAFESEKGLLALMHQSNNVDSSRCYQCVKFLVTLAQKCVPAKDYFKDLSG
HWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISAQDTLAYATALLNEKEPSGSS
NGSDGSPANENADRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7857 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaagaggagcaacacatgacgaccctcctctgcatgggtttcccagatcct
gtggctatacgcaaggcgctacgcctggcgaaaaacgacatcaacgaggctgtggcgctc
ctgaccaacgaaagccccgggcttgggtatggatatgagccgatggagagtggccctgcc
ccgggcccatgtggagacgcggagaccacagggcggactgggactggagggttcgaccca
ccccccgcttaccacgatgtggtggagagcgagaggagtaatgatgagaatgggaactgt
tctgggggcagtatggagttccccaccactaacctgtatgaactggagagccgagtgttc
actgaccactggtccatcccctacaagagagaggagtcactgggcagatgtctggtcgca
gccacctgcttagccaaacacggtctggcagatgcagatgagaactgtaagcggtttatg
gaccggtgtatgcacgaggcctttaagaagctcctgaccagtagtgctgtccataagtgg
gggacagagatccatgaggggatctataacatgttgatgttactggtggaactggtggct
gagagggtcaaacaggaacccatacctgttgggctaatgggagtactggctatggccttc
aacccagacaatgagtaccactttaagaaccgtatgaaggcgtgtcagaggaactggagc
gaggtgtttggagaggaagccatgttcgctgtgtcgcctagcaacaactaccagaaggag
cctcatggctggctggtagacttggtcaatctgtttggagagatgggagggttcactgct
atccaggctaaactcaataccgaggagatagagattgggtgtgtgtctgctctggtccag
cccctagctgtgtgtgcagaatacctcaactccagccttgtgcagcccatgttggatcct
gttatccataagatgatcacctacgttcagaaccttgaggagaaagatctcaaagacaag
aggctggtgagcatcccagagctgctgtcggccatcaaactgctgtgtatgaggttccag
actgccctggtaactgttgtggacgacctacgcctggacactctgctacgcatgttgaag
actcctcacttttccaccaaaatgaactccctcaaagaggtaactaagctgatcgaggag
agtactgtgtctaagacggtgaagaatgccattgacacagacagactgctggactggctg
gtggaaaactctgtcctctcaatagcactggagggtaacatagaccaggcccagtattgt
gatcgaataaaaggcatcattgagttgctgggcagtaaactgtctctggacgagctctcc
aagatctggatgatacaggcaggacagtcgtccacggtgattgagaacatccacaccatc
atggctgcggctgccgtcaagttcaacttcgagcagctcagccacctgtttgtccttata
cagaagagctgggaggtagagagtgaccgtgtgaggcagaagctgctcagtctgattggg
aggatcggtagagaggcccgctctgaggccaccacagggaaggtgctggaggtgctgtgg
gagttagcccacctgccaaccctgcccacctccctggtacagcaggcgtctgaggaacac
ctggccatcctcactgacgcgtacgctgtgaaggagactgtcaaacgctgctacatcatc
aaatgtatagaggacatcaagaagactcagactgaggaggagggtaaaaccagcgacatt
cagacctcatttcttactggctcctggggcaagaagaaagccaaagaaaactcattggcc
aaatcttctcaacagggcagtccccaggcggtctgggtggttccagctctgcggcagctc
catgagatcacacgctccttcatcaaacagacctaccagaaacaggacaagcagagcatc
atccaggacttgaagaagaactttgagatcgtcaaactgattacaggatctctggtggtc
tgccatcgactagcggtgtctgcagctgggaacaacggacttaccggacacacactagtg
gacggacgatacacctaccaggagtatctagatggccacctgaggttcctggccttcttc
ctccaggaggccagcctctacctggtctggaacagagccaaagaactatgggactgcctg
gtctctggacccgaagtctgcgagctggacagagagatgtgttttgagtggttcactaag
ggccagcatgatctggagagtgatgttcagcagcagctctttaaagagaagatcctcaaa
ctggagccctacgagattactatgaatggctttaatctgtttaagaccttctttgagaat
gtcaacttgtgtgaccatcgcttgaaacgccaggggactcaactgtgtgtggagcggcta
gacctggctgggatggactttatctggcgtatcgccatggaaacgcctgatgaggagatc
gctaacgaggccatacagctaatcatcacatacagctacaccaacctcaaccccaaaatg
aagaaggattctgtgtctttacacaagaagttcattgctgattgttacaaacgactggag
gcagccagttcagctctaggagggcccacgttgactcatgctgttaccagggcaaccaag
atgctgaccgccaccaccatgccgactgtagccacgtctgtccaatcaccttccaggtcc
accaagctggtgatcattgagaggctgctgctattggctgagcgttatgtcatcactatc
gaggacctctattctgtgcctcgtaccattctacctcacggagcgtcgttcaatggccac
cctgtctctctacatgtcacctatgagtccaccaaagacaccttcaccttggaggcccac
agtaacgagactataggcagcatccgctggaagattgctgagcatctcaactgtccagtc
gacaacgttcagatctttgccaacgacagcgtgttgactatgaaccgggaccagaagctg
ctgtcccagctggggttcagtgatgagcagtctctgacagtgaagagctctggcacaggg
acaccctctggtggcagctcagagtcctctgtctctgcttcctcctccagctccgctgtc
ttcaactcagcttatgctatggaacaggagaagtcccttccaggtgttgtcatggcattg
gtgtgtaatgtgtttgagatgctctaccagctggccaacctggacgaaccacggataact
ctgcgtgtacgtaagctgctgctgctgatcccaacagacccagaggttcaggacgctcta
gataactttgttcccaaagagtccagtgtctggagtcaccagaagacattgttcaccctg
ggtcaggggtcaggctctcggtctccgtctctgggttctaagcaacagcaccagcccagt
gctgcctccatcttggaatcactcttcagatcctctgctcccgggatgtccaccttcaga
gtcctctacaacctggaggtgttgagttctaagttgatgccgacctcagatgatgagatg
gctaagaccagtgtcaagtctttctgtgagaacttcctgaaagctggaggtctcagtttg
gtggtgaacgtgatgcagcgggactctattccctccgaggtggactatgagaccagacag
ggagtctactccatctgtctacaactggccaggttcttattggttggccaaagtatgccg
tcgttgctggatgatgatgtcatccgagagggtgacacgctatctagtcggccattccgt
aacgcagggcgaccagggagacagctgtcgctgtgtggaacgcctgagaagagctcctat
agacagatgtctctgtctgaacgctcctccatcagagtagaggagatcatccctgctgca
cgtgtagctatacagacgatggaggtgggggacttcacctcgacggtggcgtgcttcatg
cgtctaacctgggcggcagccgccggccgattggatctcgtcggcagtcctcagccaatc
agacctgaacacagctcactcctccccctcgtggtccgcagccgtgtcagcagcactgga
agtaactgcagctccagcagtgagggcgaggcgccgcccacagcgttgcatgctgggata
tgtgtgaagcagcagagtgtttctattaaagactgcatcattgctagagaggccctgtct
ctactggtcacctgcctacagctacggacacagcagctagggtcattctacaacctcccc
tgtgtcagcgacttcatcatcgacatcctgctgggatcagccagtggagagatccggcgc
gtggcgtgtgaccagctgtacactctgagccaatcagacacgtctgcgttccctgagatc
atcaagcccaacgtgttcctgctgcgagtcgtcctcacctcccagctgcccctctggagc
cccacgtctgtcatgagaggagtcaaccagaggttgctgtctcagtgtactgaatacttt
gaactgcgatgtcaactactggatgacctgaccagttcagagatggaggtgttgtcagtg
agtgcggcagccatgttggaagatgagatcagctggttggataactttgagcccagctgg
agctctgagatggagactagcgaggctgacaacatcctgcaggctggacacctccgcctc
atcaaaacacttctgtcactttgtggcaccgagaaggaacacctgggtccttctctgatc
cagcagctgttggatgacttcctgttccgagcgtcccgcatcatcctgaacacgtctgac
cccgcctctagctccccccccagccacgacttccaccccaagtgcagcacggccagcagc
agactggcagcctacgaggtgctggtgatgctagcagacagctctgtggccaacctacag
cttatcaccagagaactgctgtccatgcaccaccagtcagacccctcgctcagcaaggag
tttgacttcctcccgccggtggacagtcgctctgtgtcggggttcgtggggttaaagaac
ggtggagccacctgctatatgaatgctgtgttccagcagctgtacatgcagcctggcctg
gctgaggcctttctgtctatagaggacgacacagagcagccagacgagagtgttttctgt
caggtccagtctctgttcggacacctgatggagagcaagctgcagtactatgtccctgag
aacttctggaagatctttaagatgtggaataaggagctgtatgtacgggagcagcaggat
gcctatgagttcttcacttcactggtggaccagttggacgagcacctaaagaaaatcggc
cgtgagcagatcttcaagaatactttccagggaatcttctctgatcagaagatctgcaaa
gactgccctcaccggtatgagcgagaggagacgtttatggcgctgaacctgggtgtgact
tcctgtcagagtctggagatctcattggaccagtttgtcaggggggaggtgctagaagga
accaacgcctactactgcgaaaagtgcaaggagaagcgtaccacagtgaagcggacctgc
ataaagtccctgcccagtgttctctgtatccatctgatgcgcttcggcttcgactgggag
agcggacgctccatcaaatacgacgagcagatcaggtttccctgggtgctgaacatggag
ccctacacagtgtctggcatggctcgtcaggatgggggagcggaggggggagatggccgg
ggcgaggcagggggctcacccaggaagaaggtgaccatctcagagaactacgaactggtg
ggagttgtagtccacagtggacaggcacacgctggacactactactccttcatcaaggac
agacgcagtgctaggggaaggtggtataagtttaatgacaacgtggtcgaggagtttgat
atgaatgacgagactctggagtacgagtgctttggaggagagtaccggcctaaagtctac
gaccagtctaacccctaccctgacgtgcggcggcggtattggaacgcctatatgttgttc
taccagaggatcagtgaccagaactctcctgttctccctaagaagagcagagtcagtgcc
atgaggcaagaggcagaagacctcacactttcggcaccctctagcccagatgtcagtccc
cagtcgtcccctcggccccccagggccaacaatgaccgtctctctgtcctgacccgcctc
gtacggaagggagagaagaaaggactgtttgtggagaagatgcctgctaggatctaccag
atggtgagagatgagaacctgaagtttatgaagaacagagatgtgtacaacagcgactac
ttcaacttcactctgtcactggcctccgtcaacgcgacaaagctgaagcacccagcctac
caggccatggccagagagagtctccagttggcggtccactttctgttccacacctacctc
cacaccaagaagaagctgcgggtggacacagaggagtggatggctacggtggaggtgctg
ctgtctaaaagcagtgaagcctgtcactggatggctcagtacctggtgggacctgaggga
cgagagatcaccaaggtgtgtctgttggagtgtggggtgagggaggtgagggtcgtagtg
gcagccatcttggagaaaaccttagagagtgctctccacttcgctgactctggattggac
agcctgaccgatgcgctcctttccctattggacaaagacgttcctgagaacgtcaaacac
tgcaaccaatacttcagcctcttcagcaactttgctcagaggggctctggtccgtgccag
ttgttgttgaaacactcagcgtatcgcaggatgctcatcttcctcctcggacccaacaga
cagaacaaccagaatcggaggtggagtccagcccaggccagagagttcctgcacctgcac
tccactctggccctgatgactctccactcagacctcaacacacagcacacacatgatcaa
ggtgtctgtaagctgaatgtgagcagtgtccctgcctcctccaccctcctccagctcgac
actgacatcatggcctcgctcttcacccacgagggacagccttacctgctggaggtgatg
tttgcggtgcgggagttgtccggccctctgactgtgctgatagagatggtgacgtactgc
tccttctgtaatgaacccttctccctgggagtactacagctgctcaagactcagttggag
accgctccaccccatgagctgaagaacgtgttccagctactgcaggagctgctggtggtg
gaggatcctcttcagactcagagactgaagtacgcctttgagtcagagaaaggtctgcta
gcattgatgcaccagagtaacaatgtggacagcagccgctgctatcagtgtgtcaagttc
ctggttaccctggcacagaagtgtgttcctgcgaaggactattttaaagatctgtctggt
cactggagctgggcagtgcaatggctgcagaaaaagatgtcagaacactactggactcct
cagagcaacgtgtccaatgagacgtccacagccaaaacattccagcgcaccatctcagcc
caggacacgctggcctacgccacagcactgctcaacgagaaggagccatctggcagcagc
aacggctctgacggtagtccagccaacgagaacgccgaccgcagccttcgacagggttct
gagtctcccatgatgcttggtgattcaaagagtgatctggaggatgttgacccttag
DBGET
integrated database retrieval system
