KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409340
Entry
139409340         CDS       T10872                                 
Name
(RefSeq) biogenesis of lysosome-related organelles complex 1 subunit 2-like isoform X1
  KO
K16750  biogenesis of lysosome-related organelles complex 1 subunit 2
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    139409340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139409340
   03036 Chromosome and associated proteins [BR:ocla03036]
    139409340
Membrane trafficking [BR:ocla04131]
 Endosome - Lysosome transport
  Arf GTPases and associated proteins
   BLOC-one-related complex (BORC)
    139409340
  Others
   BLOC-1 complex
    139409340
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    139409340
SSDB
Motif
Pfam: BLOC1_2 DUF948 XhlA BLOC1S4
Other DBs
NCBI-GeneID: 139409340
NCBI-ProteinID: XP_071010444
LinkDB
Position
5:complement(71790490..71795063)
AA seq 186 aa
MAATGEEAAEMDCISRVSLAHPTALSLGGSSEPRGEPGETATEGQEVVTTAPKKPINSSD
GGVETAEEAVEPAEPDINELCTDMFDKMAVFLQGELTGLNICTCEDYHLLENMNKLTSLK
YMEMKDISINISRNLQDLNHKYASLQPYLEQINQIEEQVSSLEQAAYKLDTYSKKLEAKF
KKLEKR
NT seq 561 nt   +upstreamnt  +downstreamnt
atggcggccacgggagaggaggctgctgagatggactgcatctcaagagtttccttggcc
catcccaccgccctcagcctgggagggagctcagaaccccggggagagcctggcgagact
gccactgagggccaggaggttgtgactacggcgcccaagaagcccatcaacagcagtgac
ggtggggtggagactgcagaggaggccgtagagccagcagagccagacatcaatgaactc
tgtacagacatgttcgataagatggctgtcttcctacaaggagaactcactggtctgaat
atctgcacctgtgaggactaccatctactggagaacatgaacaagctgacaagtctgaag
tacatggagatgaaagacatcagcatcaacatcagcaggaacctgcaggacctcaatcat
aagtacgccagtctgcagccctacttagaacagataaatcaaatagaggaacaagtgtct
tctctggagcaggctgcttacaaactggacacctactccaagaagctggaggccaagttc
aaaaaactggagaagcgatga

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