Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409349
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Entry
139409349 CDS
T10872
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 2-like isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04114
Oocyte meiosis
ocla04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
139409349
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
139409349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139409349
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
139409349
Factors involved in mRNA localization
Trans-acting binding proteins
139409349
mRNA cycle factors
P-body specific factors
139409349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
Motif
Other DBs
NCBI-GeneID:
139409349
NCBI-ProteinID:
XP_071010466
LinkDB
All DBs
Position
5:72269017..72297009
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AA seq
622 aa
AA seq
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MDSPITHHINNSNGSSTGNMLSGGLGGGFPNLQNQEMQNPSGASASPPLPGFGTPWSVQT
SSPPPPVSNSANPIHHSNAINQLPHTDPDNSFYPGIPSSINPAFFQSFSPVSTNPCPGIN
VQGFSSQFSPQINAHQQPQQQSRRSPVSPQMHPQHHHQHQQGAFLQQRNNYNHHHQSMVK
QSPWTGSHQGSGWGSGNMSWGRDHRRGGGMGIPGSVSQVSPMKKPFPSNVIAPPKFPRSA
GSMGPKSWMEENMFRTDSNSNTLMPLQERSRMYDSLNMHSLESSLIDIMRAEQDPMKGRV
GCPHPGADGLLMLNARSYGRRRGRSSLFPIEDSLLDDGHGNQGIPGLGPNCYPHQNGERI
ERFSRKVFVGGLPPDIDEDEITNSFCRFGHLVVDWPHKAESKSYFPPKGYAFLLFQEESS
VQALIEACMEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGV
PRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQ
HGDIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAGR
EFHKPLVKEGADRPRQIHFRWN
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggactcccccatcacccaccatataaataacagcaatggcagtagcaccggcaatatg
ttgtccggaggactcgggggcggttttccgaacctccagaaccaagagatgcagaacccg
agtggcgcctcagcttcacctcccctccctggattcggaaccccgtggtccgttcagacc
agctctccaccaccacccgtttctaactcggccaaccctatccaccactcaaacgcaatt
aatcagttgcctcataccgacccagacaacagcttctatcccggtatcccctcgtctatc
aacccggccttcttccagagtttttctccggtgtcgactaatccatgcccagggattaac
gtgcagggcttcagcagccagttctcaccccagatcaacgcccaccagcagccgcagcag
cagagccgcagatcccccgtcagcccccagatgcacccccagcaccatcatcagcaccag
cagggcgccttcctgcagcagaggaacaactacaaccaccaccaccagtccatggtgaag
cagtctccctggactggcagtcaccaggggagtggctggggctctgggaatatgtcctgg
ggtcgggaccaccgtcgtggtggaggcatgggcatcccgggctctgtcagccaggtttcc
cccatgaagaagcccttccccagtaacgtcattgcacctcccaagttcccccgctccgcc
ggctccatgggccccaagtcctggatggaggagaacatgttccgaacagacagtaacagt
aacacgcttatgcctctccaggaacgctctagaatgtacgacagcctgaacatgcactcc
ctggaaagctctctgattgacatcatgcgggcggagcaagatccaatgaagggtcgtgtg
ggttgccctcatcccggggctgacggcctgctcatgctcaatgcaaggagctatgggaga
cgtcgaggccgctcctccctgttccccattgaagacagcctccttgatgatgggcacggt
aaccagggcatcccagggcttggccctaactgttacccccaccagaacggggagcgcatc
gagcgtttctcacgcaaagtgtttgtgggcggcctgccccctgacatagatgaagatgag
atcaccaacagtttctgtcgctttggccacctggtggtggactggccacacaaggctgag
agcaaatcctacttcccccccaaaggttacgccttcctgctgttccaggaggagagctca
gtgcaggctctgatcgaggcctgcatggaggaggacggcaagctctacctgtgtgtctcc
agccccaccatcaaagacaagcctgtccagattcgtccgtggaacctgagtgacagtgac
tttgtgatggacggctctcagcccctggatcctcgcaagaccatcttcgtaggaggggtc
ccccgccctctcagagcagtggagttggccatgattatggaccgtctctatgggggggtc
tgctatgctggcatcgacaccgatccagagctcaagtaccccaaaggtgcggggcgcgtc
gcattctccaatcagcagagttacatcgctgccatcagcgccagatttgtccagctgcaa
catggagacattgacaagcgggtggaggtaaagccctatgttctggacgaccagctgtgt
gatgagtgtcagggtgcgcgttgcggtgggaagtttgcccctttcttctgcgccaacgtg
acctgcctgcagtactactgtgagttctgctgggctaacatccactcccgcgccggccga
gaattccacaagccgctggtcaaagagggggctgaccgcccaaggcaaatccacttccgc
tggaactga
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