Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409367
Help
Entry
139409367 CDS
T10872
Name
(RefSeq) mast/stem cell growth factor receptor Kit-like isoform X1
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139409367
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
139409367
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocla01001
]
139409367
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ocla04090
]
139409367
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
139409367
Protein kinases [BR:
ocla01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
139409367
CD molecules [BR:
ocla04090
]
Proteins
139409367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
VEGFR1-3_N_Ig-like
Izumo-Ig
Tlr3_TMD
Motif
Other DBs
NCBI-GeneID:
139409367
NCBI-ProteinID:
XP_071010509
LinkDB
All DBs
Position
5:73468007..73513026
Genome browser
AA seq
1004 aa
AA seq
DB search
MEHHWVLFSVLLQLSFQTGSARPTITPRGLHLVIPLNIPFSLLCQGDQVVQWQREDRPKL
RGEERTNGASVLKIPRAQPGHMGRYICLEEKTGEQSSIYVYVKDPDNVFRKTIVFSILTR
AGDSASIPCLATDPRVVNLRLEPCHGGALPNGLHYAASLERGMVIYDTKKAFEGCYICTG
RLSGALVKSHSYDLTVRPVPDVPPVIELRGPKRVVLTRGQNLTLTCSTTNVNGDIKLKWA
APPGTDAVWASYPQQPAVENGSRILTEPITHVRSATLQVNSVGTQDSGRYRCEGQNEKGI
SSESIWLDVYDRGFINLAPSDNSSVRVRAGESLSLHVDMEAYPKPHTFSWSFSGQQLRNT
SDHVITKQNHRHRYNSELRLVRLKMSESGVYTFYASNGDATINQSFTVYVISKPEIVSHD
GPVDGQVRCVAEGYPAPQITWYYCEQPYMRCSHQMNATQEEQDIVTVTLLSPSFGKTEVE
SRLNITTGRFHTLECVATVEGEQDFTLFSISERTVPHELFTPLLIGIVSASALLILILIV
LFYKYLQKPKYQIQWKVIEGIHGNNYVYIDPTQLPYDHEWEFPRDKLRFGKTLGSGAFGK
VVEATAYGMSKADTVMTVAVKMLKPSAHATEKEALMSELKVLSYLGNHMNIVNLLGACTV
GGPTLVITEYCCFGDLLNFLRRKRETFFCDTLGEDCYYRNVMLQRETATAGSDGDSRNGY
MDMRPSVAGVLPNGFSSEKRISIRKPGGSSSEPDVVSEMLHEDSLSLDTEDLLSFSYQVA
KGMDFLASKNCIHRDLAARNILLTQGRVAKICDFGLARDITTDSNYVVKGNARLPVKWMS
PESIFECVYTFESDVWSYGILLWEIFSLGSSPYPGMLVDSKFYKMIKEGYRMDAPEFAPS
EMYEIMRSCWDSNPFKRHSFSKVVERIEQQLSDNTKHIYLNFSSRFPVTMGQQVTSVDQG
TQNANIVCLNSVGNSNASTQPLLASASEDIFLGEMATGLRVHQV
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggaacaccactgggtactgttttctgtcttgttgcagttatccttccaaacaggtagc
gccagacccaccatcacccccagaggcctccacctggtcattccactcaacatccccttc
agcctgctttgccagggtgaccaggtggtgcagtggcagcgggaggatcgccccaaactg
aggggcgaggagcggactaatggggcgtccgtcctgaaaatccccagagctcagcctggc
cacatgggccgatacatctgtctggaagagaaaaccggagagcagagctctatctacgtc
tacgtcaaagatcctgataatgtctttagaaagaccattgtgttcagtatcctgactcgt
gcgggagacagtgcctccatcccctgcctagcaaccgaccccagagtggtcaacctgcgc
ctggagccatgccatggcggtgccctccctaatggtctccactatgctgccagcctggag
cggggcatggttatctatgacactaagaaggcctttgagggctgttacatctgcactggc
agactgagcggtgccctcgttaaatcacacagctatgatctgactgtgcgaccagtccca
gatgtgcccccagtgattgagttgcgtgggcccaagagggtggtcctgacgcggggccag
aatctcaccctgacctgcagcaccaccaacgtcaatggagacatcaagctgaagtgggcc
gctccgccgggcacggatgccgtgtgggcttcgtatccacagcaaccggcagtggagaat
ggctcacgcatcctgactgagcccatcacacacgtccgcagcgctacactccaagtcaac
tctgtcgggacacaggattctgggagatatcgatgtgagggtcagaatgagaaggggatc
agctctgagtcaatctggctggacgtctatgatagaggtttcatcaacctggctccgtca
gataacagttctgtgcgtgtgcgtgctggggagagtctgtccctgcatgtggacatggag
gcctatcccaaaccgcataccttctcctggagcttctcaggccagcagctaaggaacacc
tctgatcatgtcatcaccaaacagaaccaccgacacaggtacaacagtgagctcaggctg
gtgcgtttgaaaatgtcagagagtggggtctacaccttttatgcctccaatggtgatgca
acaatcaatcagtcatttaccgtctacgttatcagtaaaccagagattgtatctcatgat
ggcccagttgatggacaggtgcgatgtgtagctgagggataccctgccccacagatcacc
tggtactactgtgaacagccttatatgaggtgctcccaccagatgaacgccactcaggag
gagcaggacattgtcacagtgacattgttgagtccttcctttgggaagacggaggtggag
agcaggctgaacattaccacgggaagattccacacgctggagtgtgtggctaccgtggag
ggagagcaggacttcacactgttctctatcagtgagagaacagttccccatgagctcttc
acacctctgctgattggcatagtgtcagcctccgccctcctcatcctcatcctcatagtg
ctcttctacaagtacctgcagaaacccaaataccagatccagtggaaagtcattgaaggt
atccacggaaacaactatgtgtatattgaccctacccagctcccatacgatcacgagtgg
gagttcccccgggacaaactgcgtttcgggaaaactctgggctccggagccttcgggaag
gtagtggaggctactgcttatggaatgtccaaagctgatacagtgatgacagtggcggtc
aaaatgctcaaacccagtgcccatgccactgagaaggaggctctgatgtcagagctgaaa
gttctcagttacctgggaaaccacatgaacattgtcaacctgttgggagcctgtactgtt
ggaggcccaaccctggtgatcacagagtattgctgcttcggtgacctcctcaactttctg
aggaggaagagggagacgttcttttgtgacacgttaggggaggactgctactacaggaat
gtcatgctgcagagggagacagctacagctgggtcagatggagacagcaggaatggctac
atggatatgaggccttctgtcgctggtgtcctgcccaatggcttctcctcagagaagaga
atctcgatacgcaaaccaggtggttccagtagtgagcctgatgttgtgagtgagatgctc
catgaggacagtctctctctggacactgaggatctgctcagcttctcctatcaagtggcc
aaaggcatggacttcctggcttctaaaaattgcatccacagagacctggctgcccggaac
attctgctgactcaggggcgagtggcaaagatctgtgacttcggcctggcccgtgacatc
accacagactccaactatgtagtcaaaggcaatgcccgcctcccagtcaagtggatgtct
ccagagagcatctttgaatgtgtgtacacatttgagagtgacgtatggtcctatggcatc
ttgctctgggaaatcttctcactcggaagcagtccatatcctgggatgcttgtggactca
aagttctacaaaatgattaaggaaggatatagaatggatgcaccagagtttgcaccgagt
gaaatgtatgagataatgaggtcgtgctgggactcgaacccctttaagagacactccttc
agcaaggtggtggagaggattgaacaacagctgtcagacaacacaaaacacatctatctg
aacttcagctccaggtttccggttacaatggggcaacaggttaccagcgtggaccagggg
acgcagaatgccaacatcgtttgcctcaactctgtgggcaacagcaacgcctccactcag
cccctattggccagtgccagcgaggacatctttctgggggagatggccactgggctcagg
gtccaccaggtgtaa
DBGET
integrated database retrieval system
