Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409412
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Entry
139409412 CDS
T10872
Name
(RefSeq) desmoglein-2.1-like
KO
K07597
desmoglein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Major cadherins
139409412
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139409412
NCBI-ProteinID:
XP_071010641
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Position
5:78472220..78494708
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AA seq
1223 aa
AA seq
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MNRGSLPAAAFLLLTFTVLVSVAVVEARHSAGLRRHKREWIIPPQKLDENVDYTKKEFIA
KIRSDSDDGTGNVQYSLTGVGASKYPFNLFIVNPDTGFVRITGILDRETIAMYNLSGTAK
FTDGSEAEKNIDLRIQVVDQNDNPPIFGDINPGAVYELSPKDTSIMTLTATDADEPGNEN
SKIAYTIIKQEPPGESMFYITKDGVLKVKQPTLDREVQDWYMLTVKGTDLNGRPEGNTGT
GTFRVNIKDVNDNPPTLEKDEYEGSIEENTENVEVMRFKAEDMDMENTPNWVTQFEIVKG
NEAGYFSIETDPKTNEGVLILKKSVDYEDVKHLELGIAVANQAPPYNGEGGGGGGGSGTG
AGGSWTGGGGGGTGGGGGGGGGGSGGGSGGGSSGGSGSGGGGGGSWFGGGGSTGKPMKTY
PVKIAVKNQPEGPRFDPKVKAIPISEGGDFNINKVIGSYHAIDGDTLMPAQNVRYAKGSD
PDNWLTVDELTGDIKLNKMPDRESKFLVNGTYYAKVLCMTQDMPSKTATGMVAIQVEDLN
DHCPTLTSKVQTMCMTADAITVTAVDKDAFPNGAPFTFTVIPEGTEGVWVVEHLNDTSTI
LRSQKDLWPGSYAVAMEIRDQQGHACPDQQKLKVDVCTCVDKEKACATRGAKGSTGAVLG
PAAIGLLFLGLLSLLLIPLLLLFCTCGGAGGLPGGFTEMPFDAKAQLISYHTEGQGENTE
VPLLNAPVQVDTGRVKMVNAGTIAATAGGAGLMIGGGQFQNSSSTMGGGFYQSDGLMDIG
YKNGGEIIGHGNGGGFYSEYESREGGGAYEGIALPDHYLEEYYSQKAHCAAENHVQKDSM
LVYDYEGQGSPVGSVGCCSLLESDNDLQFLNDLGPKFKTLAEVCRGERFQTEVSAPLPPR
PIISMPTAASSVTTNVASRLVSAAPVPAPAPAPAPPPAPAQVTHVERAVVRESDRLSTLR
QDMVGGSQGQTFLLQQQPMYYTTMQPMMQPVVQQMHYVVEQQVPNIQGMIMVNGPPSGSA
QGLVLQGQQVVTGTQAQGTLGRGEGGLIHMGNMSGSQGMMVVDGPVMQGGQMLQGGQMLQ
GGQVFQGGQVLQGGQLVQGGQVLQGGQAWLQQSSSLQRGGLSGSQSMLVMEGQGGSSGGS
GVQKGQGGVLGFSQGSMQRNGLSGSHRVLYTTEQSSAAQSSAGSQSGIVGLNGSSSKVSV
GPASSSRKAVIEKRVVTNQSTSK
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggggttctttgcccgccgctgcttttttgctacttacattcacggttttagtg
tctgtagctgtggtggaggcacgtcattccgctgggctaaggagacacaagagggaatgg
atcatccctccccagaaactagatgaaaatgtagactacaccaagaaagagtttatcgcc
aagatccggtcagattcagacgatgggactggtaatgtgcagtactctctaactggggtg
ggagcttctaaataccccttcaacctgttcatagtgaaccctgacactggctttgtacgc
atcactggtatcctggaccgggagactatcgccatgtacaatttgtcaggtaccgctaag
ttcactgatggcagtgaagcagaaaagaacattgatttgaggatccaagttgtggatcag
aatgataaccctcctattttcggtgatattaacccaggagcggtgtacgagctcagccca
aaagacacgtccatcatgacattgactgcaacagacgctgacgaaccagggaatgagaac
tctaagattgcctacaccataattaaacaggagcctccaggagagagcatgttctacatc
accaaggatggagtactgaaagtaaaacagcccacactggacagagaggtgcaggactgg
tacatgctgacagtgaaaggtacagatctgaacggtagaccagagggcaacaccggcacc
ggaacctttagagtcaacatcaaggatgtgaacgacaatcctcccactctggagaaagat
gagtatgagggcagtattgaggagaacacagagaacgttgaggtgatgaggttcaaagcg
gaggacatggatatggagaacactcctaactgggtgactcagtttgaaatcgtcaaggga
aacgaggctggctacttcagcattgagacagaccccaagaccaacgagggagttctgata
ctcaagaagtctgtagactatgaagacgtcaaacaccttgagctgggaatagccgtagct
aaccaggctccaccttataatggtgaaggaggaggaggaggaggaggaagtgggacagga
gcaggaggaagttggacgggaggaggaggaggtgggacaggaggaggaggaggaggagga
ggaggcggcagtggaggcggcagtggaggaggcagcagtggaggaagcggcagtggagga
ggaggtggaggatcgtggtttggtggtggaggttctacagggaaacctatgaagacctac
ccagtgaagatcgctgtgaagaaccagccagaggggccacggtttgaccccaaggtcaag
gctatccccatctcagagggaggagacttcaacatcaacaaggtgatcggctcctaccat
gccatcgacggagacacactaatgcctgcacagaacgtcaggtatgctaagggctctgac
ccagacaactggctgaccgttgatgagttaactggggatattaaactcaataagatgcct
gacagagagtccaagttcctggtcaacgggacatactacgccaaagttctctgcatgacc
caagacatgccctctaagacagccacgggtatggtagccatccaagtggaggacttgaac
gaccactgccccacgcttactagtaaagttcagaccatgtgtatgacagccgatgctatt
accgtgactgcagtggacaaggatgcgttccccaacggagcccccttcaccttcaccgtc
atcccagagggaacagagggagtgtgggtggtcgagcacctaaacgacacctcgaccatc
ctgaggtcccaaaaggatttgtggccgggctcctacgcagttgccatggagatccgcgac
caacaggggcacgcgtgtcctgaccagcagaagctaaaggtagatgtctgcacgtgtgtg
gacaaagagaaggcgtgcgcgacgcgaggagctaagggctctactggggcagttctaggg
cctgcagcaattggactgctcttcctgggtctgctgtcgctactgctaatccctctcctg
ctgttgttctgtacgtgtgggggtgccggaggtcttcctgggggcttcactgagatgccc
tttgacgccaaggcacaacttatttcctaccacactgagggacagggggagaacacggaa
gtacctctgctgaacgcaccagttcaggtcgacacaggaagggtcaaaatggtcaacgcg
ggaaccattgcagcaacggccggaggggcggggctaatgataggtggtggtcagttccag
aactcctcctccacgatgggcggtggattctaccaatcagacggccttatggatattgga
tataagaatggaggagagataatcggccatgggaatggagggggcttttattctgagtat
gagagcagagaaggaggaggagcctatgaaggcatcgccctgcctgatcactacctggag
gagtactactctcagaaagctcactgtgcagctgaaaaccacgtccagaaggacagtatg
ttggtgtatgactacgagggccagggctctcctgtgggctcggtgggatgctgcagcctc
ctggaatctgacaacgacctccagttcctcaatgacctagggccaaagttcaagaccctg
gccgaggtgtgccgcggagagaggttccaaaccgaagtctctgcgcctctgccacccaga
cccatcatctccatgccaacagcagccagcagtgtgacgaccaatgtggcgtccagactg
gtttccgccgccccggtcccagccccagccccagccccagcaccgccccctgccccggcc
caggtgacacacgttgagagggctgtggtgcgggaatcagatcgtttgtctactctgagg
caggacatggtgggaggaagccagggccagaccttcctactgcagcaacagcctatgtac
tacaccaccatgcagcctatgatgcagcccgtggtgcagcagatgcactatgtagtggag
caacaggttcccaacatacagggcatgataatggtcaacgggcctccgtcaggctcggcc
cagggcctagtgctgcaagggcaacaggtggtgaccggtacccaggctcagggcacgctt
ggcaggggagagggaggcctgatccatatggggaacatgtctggttctcagggtatgatg
gtggtggatgggccggtgatgcagggggggcagatgcttcaaggggggcaaatgctgcag
ggggggcaggtttttcagggagggcaagttcttcagggggggcagttggtacaagggggt
caggtccttcaggggggtcaggcctggctgcagcagagtagctccctgcagcgagggggc
ttatcagggtcacagagcatgctggtgatggagggacaggggggtagcagcggaggtagt
ggggtgcagaaaggccagggaggggtgttagggttctcccaggggtccatgcagaggaac
ggcctctctggctcacacagagttctttacaccacagagcagagctcagccgcacagtcc
agcgcaggctcacagagcggcattgtaggattgaacgggtcctccagcaaggtcagtgta
ggccccgcatcctcctcccgcaaggcggtgatagagaaaagagttgtgaccaaccagagc
accagtaaataa
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integrated database retrieval system
