Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409426
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Entry
139409426 CDS
T10872
Name
(RefSeq) GDP-mannose 4,6 dehydratase isoform X1
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00051
Fructose and mannose metabolism
ocla00541
Biosynthesis of various nucleotide sugars
ocla01100
Metabolic pathways
ocla01250
Biosynthesis of nucleotide sugars
Module
ocla_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
139409426
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
139409426
Enzymes [BR:
ocla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
139409426
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
Polysacc_synt_2
Motif
Other DBs
NCBI-GeneID:
139409426
NCBI-ProteinID:
XP_071010671
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Position
5:79124603..79365289
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AA seq
377 aa
AA seq
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MAQCTEPSTSTGENGELKKPRKVAVITGITGQDGSYLAEFLLEKGYEVHGILRRSSSFNT
GRIEHLYQNPQTHTEGKDGTTGGHMKLHYGDLTDSTCLVKIINQVKPTEIYNLGAQSHVK
ISFELAEYTANVDGVGTLRLLDAIKTCGLTNSVKFYQASTSELYGKVQEIPQKETTPFYP
RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQL
ESFSLGNLDSKRDWGHAKDYVEAMWLMLQQEEPEDLVIATGEVHSVREFVEKSFKHVGKT
IVWEGKDENEVGRCQETGVIHVKVDSKYYRPTEVEYLQGDSTKALTKLGWKAKITFEELV
KEMVDADIHLMKNNPNA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcccaatgcacggaaccgtctaccagcaccggggagaacggagagctgaaaaagccg
aggaaggtcgctgttatcacgggcatcactggacaggatggctcctacctggctgagttc
ctgctggagaagggctatgaggttcatggtatcctgcgaagatccagctctttcaacact
ggtcgtattgagcacctgtaccagaacccccagacacacactgagggaaaggatggaact
acaggtggccacatgaagctacactatggggacctgacagacagcacttgcctggtgaag
atcatcaaccaggtcaaacctacagaaatctacaacctgggagcccagagccacgtcaag
atctcctttgagctggctgagtacacagctaatgtggacggtgttggtaccctgcgtctg
ctggacgctataaagacgtgtggtctgaccaacagtgtcaagttctaccaggcctctact
agtgaactctatgggaaggtacaggagatccctcagaaggagaccacgccgttctacccc
cgctcaccttacggtgctgctaagttgtatgcttattggattgtggtgaacttcagggag
gcctataacctgtttgctgtcaatgggatcctcttcaaccacgagagcccaagaagagga
gcgaacttcgtgacgcgtaagatcagtcgttctgtggcgaagattcacctgggccagctg
gagagctttagtctgggtaacctggactccaagagagactggggccacgccaaggactac
gttgaggctatgtggctgatgcttcagcaggaggagccagaggaccttgtcatagcgacg
ggggaggtccatagtgtcagggagtttgtggagaagtccttcaaacatgtgggcaagacc
attgtgtgggaggggaaagatgagaacgaggttggtcgttgccaggagacaggggtgatt
catgtgaaggtggactccaagtactaccgtcctactgaagtggaatacctgcaaggtgat
agcaccaaggcactgacaaagttaggctggaaagcaaagatcacttttgaggaactggtg
aaagagatggttgatgctgacatccatctcatgaagaataaccctaacgcataa
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