Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409458
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Entry
139409458 CDS
T10872
Name
(RefSeq) dynein axonemal intermediate chain 3
KO
K24722
dynein axonemal intermediate chain 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139409458
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139409458
04812 Cytoskeleton proteins [BR:
ocla04812
]
139409458
Cilium and associated proteins [BR:
ocla03037
]
Motile cilia and associated proteins
Dynein arm
139409458
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
139409458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNAI3_WD
DNAI3_N
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_RIG_2nd
WD40
WD40_RFWD3
EIF3I
Motif
Other DBs
NCBI-GeneID:
139409458
NCBI-ProteinID:
XP_071010732
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All DBs
Position
5:82174311..82204629
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AA seq
892 aa
AA seq
DB search
MSTKRPKSTTTTTSKGKDKKADESSAGSVAGSGHPNDILPLTLTSATQELFGCRCDEDVT
GDNPYKILRKEDIVQDMRMRAAVSDFSPMKQLVLDYPEDELLLVYDRDFIYGSSFYLVLT
AEAKERHLKPVVALGVEVALEREPSEVFAAQKTSEPQPWISLGSEQEIEEESVTDSRPRL
KYRISRVRREFGAPIFFSDRNAMETKDGFIECTPYQDKNFSLKQMERHTGVQTIPNLKSS
STQTQWTYPRSMCTQYEPREFSEEKKENCLQSEKLKNFVNSVASRFEIAIQQNEIMDVFF
DDWKALSEEDSGYGRKADPHLKEYQSFTDLHFSKEKTISNINWHPTINGVIAVAVTERLS
FEDRINGSTKLLLNPSLILFWSFSDPINPQLLLECPDDVFSFEFCPSDPNIIVGGCMNGQ
VVLWDISTHVEQLQGTRTSGGKNIAANTNALQGFEDKRENETPVVRYCAVSGIENGHKAP
ITDIQWLPGTFEVSRMGVPMENKNGICVQIVTCAPDCCVMFWDIRAPRVLQTMADQRKQK
VEEKPLENPHGVPNTFKHLDLTWKPLIRVSLPKIDTSGEYSPLKISLRDNTCDNHTGSNA
DRAHLNAERSEVAPEYALLRVPSAKQLKPLEDICTRLYAGTEDGELVYTDWKLEKDNDSG
RLFSAKPSHRFIIHDGQVNTVRRSPFFKDIILTVGGWTFAIWKEGVTNGPIIQSSCSQKK
CTVGYWSQSRPAVLFIGKEDGNIDVWDLLEKTHEPSQTQNITATQITCIKPWIVSSKQHL
LAVSDHLGTLHILEIPWTLRSPSSNEKLSMSKYFEKEVDRLVYFEKRREMRAKEKKDYEA
EELRKKTEPIIPEKQVEQILEEAMKEYEDYLSLETVILKEMGLLPDTDKVDI
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaaagagacccaagagcacaaccactaccaccagtaaggggaaagacaaaaag
gctgatgagtcgtctgcaggaagtgttgcagggtctggtcatcctaatgacatcttgccc
ttgacgttgacctcggctacccaggagctgtttgggtgtcgctgtgacgaggacgtcacg
ggggacaacccctacaagatcctgaggaaagaggacattgtgcaggacatgaggatgagg
gcagctgtgtctgatttcagccccatgaagcagctggtgctggactaccctgaagatgag
ctcctcctggtctacgacagagacttcatctacggatccagcttctacctggttctaaca
gcagaagccaaggagaggcaccttaagcctgtagtggctttgggagttgaggtagctttg
gagcgggagccgtcggaggtgtttgcagcccagaaaacctctgaaccccaaccctggatc
tctctgggcagcgaacaggaaatagaggaagagtctgtcactgactccagacccaggttg
aagtataggatctccagggtgcggagggagtttggggcaccgatcttcttctctgaccgt
aatgccatggagaccaaggatggcttcattgaatgtaccccctaccaggacaagaacttc
agcctcaagcagatggagagacacactggggtgcagactatccccaacctcaagagctcc
agcacccaaacacagtggacatatccaaggagtatgtgcacgcagtacgaacccagagag
ttcagtgaggagaagaaagagaactgcctccaatctgagaagctgaagaattttgtcaac
tctgtggcctccaggtttgagatagccatccagcagaatgaaatcatggatgtgttcttt
gacgactggaaggccctgagtgaggaggacagtggctacggacggaaggctgacccacac
ctgaaggagtaccagtccttcactgacctgcacttcagcaaggagaagaccatcagcaac
atcaactggcaccccaccatcaacggtgtgatagcggtggctgtgacagagaggctgtcc
ttcgaggacaggatcaatggctccactaagctgctcctaaacccctccctcattctcttc
tggagcttctctgatcccatcaacccacagttgctgttggagtgcccagacgacgtcttc
tcctttgagttctgcccttctgacccaaatattattgttggtggctgcatgaacggccag
gttgtgttatgggatatatccacccatgtagaacaattacagggcacacgcaccagtggt
ggaaagaacatagcagcaaacaccaacgctttacagggctttgaagacaagcgggagaat
gagacccctgtggtgcgttactgtgctgtctcaggcatagagaatggccacaaagcaccc
attacagacatccagtggctgccgggaacctttgaggtctctagaatgggggtaccgatg
gagaacaagaatggaatatgtgttcagatcgtcacctgcgcccctgattgctgtgtgatg
ttctgggatatacgtgctccgagggtactccagaccatggccgaccagcggaaacagaag
gtggaggagaaacccctggagaatcctcacggtgttcccaacaccttcaaacacctcgac
ctcacatggaaaccactcatcagggtttccctgcctaagattgataccagcggggaatac
agccctttgaaaatcagcctgcgagacaacacctgtgacaaccatacaggtagcaacgca
gaccgggcccacctgaatgcagagaggtcagaggttgctccagagtacgccctgctcaga
gtgccttcagccaaacaactcaaaccgctggaggacatctgcaccaggttatacgcagga
accgaggatggagagcttgtgtacacagactggaagttggagaaggacaacgactctgga
cgactgttcagtgctaagccctctcatcggtttataatccatgatgggcaggtgaacact
gttcgtcggtctcccttctttaaagacatcattctgaccgtgggaggatggacctttgcc
atctggaaggagggcgtcacgaacggccccatcatccagtcatcgtgttctcagaagaag
tgcactgtgggatactggtcccagtcacgtccagctgtgctcttcatcggtaaggaggat
gggaatattgatgtgtgggaccttctggagaagacccatgagccctcccagacccagaac
atcactgccacccagatcacatgcatcaaaccctggatcgtctcctcaaagcagcatctc
ctggctgtgtctgatcacctgggcactctgcatattctggagatcccatggacacttcgc
agcccctccagcaatgagaagctgagcatgagtaagtactttgagaaggaggtggacagg
ctggtgtactttgagaagaggagggagatgagagccaaggagaagaaagactacgaggca
gaggagctgagaaagaagacggaacccatcataccagagaagcaggtggagcagatcttg
gaggaggccatgaaggagtatgaggactacttgtccttggagacggtcatcctgaaggaa
atggggctgctgccagacacagacaaggttgacatctga
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