Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409466
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Entry
139409466 CDS
T10872
Name
(RefSeq) probable proline--tRNA ligase, mitochondrial
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139409466
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocla01007
]
139409466
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139409466
Enzymes [BR:
ocla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
139409466
Amino acid related enzymes [BR:
ocla01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
139409466
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
139409466
Prokaryotic type
139409466
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
139409466
NCBI-ProteinID:
XP_071010742
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Position
5:complement(83098393..83102650)
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AA seq
486 aa
AA seq
DB search
MEVLMHHLQQRILPHLPRAFTTPCKSHSSCAAGHSPNPTPIGSISRPSTHLPLVSRLFQP
SNLRDVGQESRAQGEMTCKSQRLMQQAGLIHPSNPGCYYYLPATVRSMEKLVRLIDQEMQ
RIGGQKLDMPSLCSAELWRRSERWDLMGKELFRLRDRHGAEYCLGPTHEEAVTELLASQG
TLSYRQLPLMLYQMTRKFRDEPKPRFGLLRGREFYMKDMYTFDVNEEAAYHTYESVCQAY
NRLFSRLGLRIVQVQADTGKIGGKLSHEFQLPADIGEDRLLICGSCSFSANVETMEPGRT
DCPQCQAGTLVESKGIEVGHTFYLGTKYSHIFNATFNNTQNKPAVTEMGCFGLGVTRILA
AAIEVMSTEEAIRWPGLLAPYQVCVLPPKRGSKVDEVAGLAEEVALSLGEALPSLRGEVV
LDDRTQMTIGKRLKDASQLGYPYVVALGQKATEEIPRFEVICQQTGETMFLSRDGLVDLL
KRVETV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcctaatgcatcaccttcagcagagaatcttaccccacctgcccagagccttc
accactccttgtaagagccattcaagctgtgctgctggacattccccaaacccaaccccc
attggctccatctcccgacctagcacacaccttcccctagtatcccgcctcttccagccc
tccaacctgcgtgatgtggggcaggagagtcgtgctcagggggagatgacctgcaagagc
cagagactgatgcagcaggcaggtctcatccacccttccaaccctggctgctactactac
ctcccagccacagtgcgctccatggagaagctggtgaggctgatcgaccaggagatgcag
aggattggtgggcagaagctggacatgcccagcctgtgctctgctgagctgtggagacgc
agcgagcgctgggacctgatgggaaaagagctgttccgcctgagggaccgccacggagct
gagtactgcctgggccccacccatgaggaggcagtgacagagctgctggcctcccaggga
accctgtcctacagacagctgcctctaatgctttaccagatgacccgcaagttccgtgac
gagccaaagcctcggttcgggctgctacgggggcgggagttctacatgaaggacatgtac
acatttgatgtgaatgaagaggctgcctaccacacgtatgagtctgtatgtcaggcttac
aaccgtctcttctcccggctgggcctacgcattgttcaggtccaggcagacacagggaaa
atcggaggtaaactctcccacgagttccagctcccagcagacatcggagaggacagacta
ctgatctgtgggagctgctccttctctgctaatgtggagaccatggaaccaggccggact
gactgcccacagtgccaggcaggcacactggtggagtccaagggcatagaggtgggtcat
acattctaccttggcaccaaatactcccacatattcaatgccaccttcaataacacccag
aacaagcctgctgtcactgaaatgggctgcttcgggctgggggtgacccggatccttgct
gccgccatagaggtgatgtccacagaggaggctatccgctggcctgggctacttgcccct
taccaggtctgtgttctgccccctaaaaggggcagtaaggtggatgaggtggctggttta
gctgaggaggtggctctttctctgggggaggctctgcccagcctaagaggtgaggtggtt
ctggatgaccgtacacagatgaccattggtaagaggctgaaggatgccagtcagcttgga
tatccctacgtggtggcattggggcagaaggctacagaggagatacccaggtttgaggtg
atctgtcagcagactggtgagactatgttcctcagtagggatggactggtagacctactc
aaacgagtggagacagtctga
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