Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409478
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Entry
139409478 CDS
T10872
Name
(RefSeq) EF-hand calcium-binding domain-containing protein 7
KO
K23852
EF-hand calcium-binding domain-containing protein 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
139409478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139409478
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
EVC complex
139409478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
EH
SPARC_Ca_bdg
EF_assoc_2
EFhand_Ca_insen
SAD_SRA
Motif
Other DBs
NCBI-GeneID:
139409478
NCBI-ProteinID:
XP_071010774
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Position
5:complement(84572648..84593272)
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AA seq
617 aa
AA seq
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MSLQASSQSIGMQKCTDEETFYMHCRAAYLTVFRSSLASISSKHQLCRVLQQAGRNPSQA
TLNKHWTPSTTKLNFDDFCEIVKNERPTEVHELMRAFRKMDINGDGYISHNELHIVLTSR
GEKMAAKEVDAIFSLADTNKDGKLDYAEFCRLLESTAEQCQIAALERLEADAKLKRQNFG
NELDSPPKSLASTAVTVPQPSHKTEPGITPKKDSRSSSRPSSARSRRSSLSNAITMAASN
TKSVKLAEPTSIQDWHHTCMKGSFFLEEDGGITSLQYRLTVPQTATVYLTIRPLNLSQRL
EKPSSWMSVDTAVFVVSGKDAKEDSTLVCFTESRDKEKCCWKGELSAGTYCLLPFTTSCR
LRKRTRKSVSKPVTLVNRTDTGELDLTRDFRGALSDIFEVIDLDGNGLLSLEEYNFFELR
TSGENCDEEAWAVCKENFDTRKNQLSRQGFMELNLMEASERGGDPTDLWVTLEAMGYNRN
LEMVEACPFLIDVYCEEGQCTLQPVSLESGHRILNTALQRSITARSEVKTLRGQENVLVY
TYRGEHRISTVIANKTNQKVTVHVNNEQSKNCSSSRGMSVFAVEVPARTKMVCQHVLPIN
EHQEWTYNCVESIIPCQ
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacaggcatcttctcagtctatcgggatgcagaaatgtactgatgaggaaacg
ttctacatgcactgcagagctgcctacctgactgtatttaggtctagtctggccagtatc
agctccaaacatcagctatgccgtgttctccagcaggcaggcagaaatccatcccaggca
actctcaacaaacactggaccccaagtaccactaagctgaactttgatgatttctgtgag
atagtgaagaatgagaggccgacagaggtgcacgagttgatgagagccttcagaaagatg
gacattaatggagatggctatatctcacacaatgaactacacatagtcctcacttcaaga
ggtgaaaagatggctgccaaggaggtggatgccattttttcattagctgataccaacaaa
gatggcaaattggactatgccgagttctgcagactgttggagtccacggcagagcagtgt
cagattgcagctctggagagactggaggctgatgccaagctgaagaggcagaactttggc
aacgagttagacagccctccaaagagcttagcgtccaccgctgtgactgtcccccagcca
tctcacaaaaccgagccgggcatcacaccgaagaaagacagcagatcgtcgtcccggccc
tcctcagctcgcagtagacggtcgtcactgtctaacgccatcaccatggcagccagcaac
actaagagcgtcaagctggcagagcccacatctatacaggactggcatcacacctgtatg
aagggcagtttcttccttgaggaggatggaggcatcacgtccctgcaataccgtctcacc
gtcccccagacagccaccgtctacctcaccatcagacctctcaaccttagccagagactt
gaaaagccctcatcctggatgtcggtggacacagctgtctttgtggtgtcaggaaaagac
gctaaagaggactctactttggtgtgtttcacagagtcaagagacaaagagaagtgttgc
tggaagggggagctgagtgctggtacctactgcctccttccattcaccacgagctgtagg
ctgaggaagaggaccaggaagagtgtgtctaaacctgtcacgctggtcaacaggactgac
acgggggagctggacctcactagggacttcaggggggcgctgtctgacatctttgaggtg
atagacctggatgggaacggcctcctcagtctggaggagtacaacttctttgagctcagg
accagtggagagaactgtgatgaggaagcatgggctgtctgcaaagagaactttgacacc
cggaagaaccagctcagtcgtcagggcttcatggagctcaacctgatggaggccagcgag
agggggggagaccccacagacctctgggtaacgctggaggccatgggctacaaccgcaat
ctggagatggtggaggcatgtccgttcctgatagatgtttactgtgaggagggtcagtgt
actctgcagccggtcagtctggagtcaggccacaggatcctgaacacagccctgcagagg
tccatcacggccaggtcagaggtcaaaaccctcaggggtcaggagaacgtcctggtctac
acctaccgaggagaacacaggatctccaccgtcatcgccaacaagaccaaccagaaggtg
acggtgcacgtgaacaacgagcagagtaagaactgcagcagcagcagagggatgagtgtg
ttcgctgtggaggtccctgctagaaccaagatggtgtgccagcatgtcctgcccatcaac
gagcaccaggagtggacctacaactgtgtggagagcattataccatgccagtga
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