Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409495
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Entry
139409495 CDS
T10872
Name
(RefSeq) thrombopoietin receptor-like isoform X1
KO
K05082
thrombopoietin receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
139409495
04060 Cytokine-cytokine receptor interaction
139409495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ocla04050
]
139409495
04090 CD molecules [BR:
ocla04090
]
139409495
Cytokine receptors [BR:
ocla04050
]
Interleukin receptor families
Prolactin receptor family
139409495
CD molecules [BR:
ocla04090
]
Proteins
139409495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EpoR_lig-bind
LIFR_N
IL6Ra-bind
CRLF2-like_D2
LIFR_D4
Ig_RIMBP2
CRLF2_D1
DUF3671
Motif
Other DBs
NCBI-GeneID:
139409495
NCBI-ProteinID:
XP_071010829
LinkDB
All DBs
Position
5:85852258..85861421
Genome browser
AA seq
674 aa
AA seq
DB search
MGHTCHLSVDVMDLHLTPRVVCVWLWIIAGWVNVLGHGIIDESVPHLSKKDVLLLAGDAD
PKCFTRTQYDFTCFWETPGNTAYDFFYRNDNEEKEKRCKLTLQRTEKGEEEEEEGKVLHI
CFFPCSDVFLFTLTHIRVVESSSNYTLFTRTISVEDQGLLEPPVNVSLHPTGQAGQLQVS
WHAPRDWENNVHYGMHYSSQGLGERTELIKSMRSPIHSLVSLLPGEVVSVQLRVKPNGYS
ETETSGHWSDWSVPITAMVPQSAADISLLCHTSDLQNITCQWNGQSYRDATYTLNYKLGP
SKREGWRKCLQNENTSYHCRFHGAESSEILVKLSTGPGSLKRTFYTEPFRLNNSIQTGPP
GRLRGKWEGGRLRLRWDTPLLALSLHLMYQLRYQPQGEAVWKLVTLQVSENSICLDVQTG
SQYFIQVRARPNGSVYAGYWSDWSPPLTVDTPSDIAGALFIICIPLMMLILSVVFLSMIS
RYLSKLKRYLWPPIPNLDKVLHGFLTDINGQTWDPPFIIKQYSEETPASVVEIMSEREAP
DGGKLPRESSLLLSPERGSAGGEEERLPTLALELSQDYVTLATDDVIPCLRGNKYVYDGE
VGAESRSLGEDEVLQIRCHCSSNFPSSSSTTDILNRSYMLLAEQPIERPDCQDSSRACKL
YANLKGTNSANANT
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgggacacacttgccacctgtctgtggatgtcatggatctccatctcaccccgagggta
gtctgtgtctggctctggatcatcgcaggctgggtgaacgtactggggcatgggattata
gatgagtctgtccctcacctgtcaaagaaagatgtgttgttgttggctggtgatgcagat
ccaaagtgttttaccaggacacagtatgacttcacctgtttctgggagacaccaggcaac
acggcttatgacttcttctacaggaatgataatgaggaaaaggagaagcggtgtaaactg
actctccagaggacagagaagggggaggaagaggaggaggaggggaaggttctccacatc
tgcttcttcccttgctctgacgtcttcctgttcacgctcacacacatcagagtggtggag
agcagctccaactacacacttttcacacgcaccatcagcgttgaggaccagggtctgctg
gaaccccctgtgaatgtatcccttcacccaacagggcaagctgggcagttgcaggtgtct
tggcatgcaccaagagattgggagaacaatgtgcattatgggatgcattactcctcccag
ggactgggggagaggacagaattgataaagtccatgaggtcccccattcacagcctggtt
tctctgctgccaggggaggtggtcagcgtccagctgagggtcaaacccaatggctacagt
gagacagagaccagcggtcactggagcgactggtcggtccccatcactgccatggtacct
cagagcgcagctgatatctcattgttgtgtcatacctctgacctgcaaaacatcacctgc
caatggaatgggcagtcctacagagatgctacctacaccttaaactacaagctgggaccc
agtaaaagggagggttggagaaagtgtctgcagaatgagaacacctcctaccactgccgt
ttccatggagcggagtccagcgagatactggttaaactcagtactggtcctggttctctc
aaacggaccttctacactgaacccttcagactcaacaacagcattcaaacaggccctcca
gggaggctgagggggaagtgggaggggggcaggctgcgtctgagatgggacacaccccta
ctggctctgtctctccacctgatgtaccagctccgctaccagcctcaaggggaggccgtc
tggaagctggtgaccctgcaggtttctgagaacagtatttgtctggacgttcagactggc
agtcagtactttatccaagtcagagccaggcccaacgggtcagtctatgctggctactgg
agcgactggtcacccccacttactgtggacacaccttcagatatagcaggggccctcttc
atcatctgcattcctctcatgatgctcatcctatcagttgtgttcctctcaatgatctcc
aggtatctcagtaagctcaaacggtatctgtggccaccaatcccaaatcttgacaaagtc
ctgcacggcttcctgacagacatcaacggccagacttgggaccctcccttcatcatcaag
caatattctgaggagaccccagcctctgtggtggagattatgtctgagagggaggctcca
gatggagggaagcttcccagggagtcctccttactactctccccagaacgaggctccgct
ggcggggaggaggaaaggctccccaccctggccctggagctcagccaggactacgtgacc
ctggccacggatgacgtcatcccctgtctccgagggaacaagtatgtgtatgacggggag
gtgggggcagagtctcgaagcctgggggaagatgaggttctccagataaggtgtcactgc
tcctccaacttcccatcatcctccagtaccacggacatcctcaaccgctcctacatgctg
ctggccgaacagcctatagagagaccggactgtcaggacagcagcagggcctgcaagctc
tatgccaacctgaagggaacaaactcagctaatgcaaacacctga
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