Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409519
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Entry
139409519 CDS
T10872
Name
(RefSeq) BRISC and BRCA1-A complex member 1
KO
K20776
BRISC and BRCA1-A complex member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139409519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139409519
03036 Chromosome and associated proteins [BR:
ocla03036
]
139409519
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139409519
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
139409519
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
139409519
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
139409519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
Motif
Other DBs
NCBI-GeneID:
139409519
NCBI-ProteinID:
XP_071010891
LinkDB
All DBs
Position
5:complement(89224558..89237139)
Genome browser
AA seq
373 aa
AA seq
DB search
METPQPGPADGEERSVELRPRTRSNPEGAEDRRSSTGSLGNSNPSTPQPAVGSRVEGEGE
ASTSDSPPSSTTTTVSATTAQTVAPIVAATVNAIVGLPTPTPVAKDRPKPTQAPPPLTPP
IPPTAEFQLRAPRVNCPEKVIICLDLSEEMSSQKLESFNGSKTNALNISQKMIEMFVRTK
HKIDKRHEFALVVVNDDALWLSGFTSDPRELCSCLYDLDTNVCETFNLEDLLSVIRQKID
LPLMDNIQTIPPPFVVRTLLIYSRHAGQLQFSPSDAVNSMLLSPYFFFDVVYLHNGAEEQ
GDEASWRDIYTSFCNLDSKGTCYHFEVSLCGPAIELHNCMAKLLSHPLQRPFQSHASYSL
LEGDDPQDVEATV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggagaccccacagcccggcccagcagacggagaggagcgatcagtggagctgcggccc
agaacacgctcaaacccggagggtgcagaggacaggcgcagtagcactggtagcctaggc
aacagcaaccccagcaccccgcagcccgcagtgggaagccgagtggagggagagggggag
gcctcgaccagcgacagtcctcctagctccaccaccaccacagtctctgccaccacagcc
cagaccgtagcccctatagtggcagctacggtcaatgccatagtaggcctgcccaccccc
acgccagtggccaaggacaggcccaaacccacccaggctcctccccctctgacgcccccc
atccctcccacagcagagttccagctacgagcaccccgcgtcaactgtccagagaaagtg
atcatctgtttggatctctctgaagagatgtcatcacaaaaactggagtccttcaatgga
tccaagaccaacgctctcaatatttcccagaagatgattgagatgtttgtgagaacaaaa
cacaagattgacaagcgccatgagtttgccctggtggttgttaatgatgatgccttgtgg
ctgtcaggtttcacctctgaccccagggagctgtgcagctgtctctatgacctggacacc
aacgtgtgtgaaaccttcaatctagaggatcttcttagtgttatccgtcagaagatagat
cttcctctcatggacaacatccagaccatcccccctccgtttgtagtcaggactctcctc
atctacagtagacacgctggacagctgcagttcagcccctcagacgctgtcaatagcatg
ctgctgtctccctacttcttctttgatgtggtttaccttcacaacggggctgaggagcag
ggggatgaggccagctggagggacatctacacatcgttctgtaacctggactccaaaggc
acctgttaccacttcgaggtatctctgtgtgggccggccatcgagctccacaactgcatg
gccaagctgctgtcccaccccctccagagacccttccagagccatgcctcctacagcctg
ctagagggagatgacccccaggacgtagaggccaccgtctaa
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