Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409571
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Entry
139409571 CDS
T10872
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X1
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139409571
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FERM_C
FERM_M
FA
FERM_N
SOS1_NGEF_PH
PH_13
RHG20_PH
IQ_SEC7_PH
PH_20
Motif
Other DBs
NCBI-GeneID:
139409571
NCBI-ProteinID:
XP_071011026
LinkDB
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Position
5:92801867..92886613
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AA seq
1103 aa
AA seq
DB search
MGEMEGSYRAIQTPGTRLGAQFNAGISTLEPGQSLSNALGPGGRSPGRGLQLRVQGLDDS
QEFYDLESRADGQTLLSDVFRRSNLMESDYFGLEFQNMQMSWVWLEPTKLVVKQVKRPMN
TLFRLSVKFFPPDPGQLQEEYTRYLFSLQMKRDLLEGKLSCTENTASLLASHLLQSEIGD
YDDMADRDFLKLNKLLPNQERIQERIMELHYRHLGQTPADSDFQVLEIARKLEMYGVRFH
PAADREGTKINLAVAHIGLQVFQGNTKINTFNWSKIRKLSFKRKRFLIKLYPEVHGPHQD
TLEFQMVSRDQCKIFWKNCVEHHSFFRLLDQPQPKSKAILFSRGSSFRYSGRTQKQLVEY
VKDSGARRTPYQRRNSKVRMSARSLALDVPKQTFSFNDSLRAPGSPSSATGSFHSIQVSS
SPPRPEPQAQSIQPPPQSQAQSTQPPPQSQAQSTQSQAQSTQPPPQRQAQSTQLPPQQQQ
TQLLPPQLARPSSPPAKEDPHKATDIPPCHHAFSQGSSMDSPQLSPFNSKSSPLCLSPSF
QMSTLSLPGAGQAPSPLQSPILSEVGTNRLEEEEEEGRRKRYPTDKAYFIAKEILTTERT
YLKDLEVITVWFRSAVIKENAMPEGLMTLLFSNIDPIYEFHRGFLKEVDQRLALWEGRSN
AHVKGDYQRIGDVMLRNMCALKEFTNYLQKHDEVLTELEKATKRLKKLETVYKEFELQKV
CYLPLNTFLLKPIQRLMHYKLILERLCKHYSPDHPDHNNCREALKEVAEMTNQLQSSLIR
LENFQKLSELQRDLIGIENLTAPGREFIREGCLYKLTKKGLQQRMFFLFSDQLLYTSKGV
TATNQFKVHGQLPLHGMILIVLEAPVEESENEWSVPHCFTIYSAQRTIVVAASSKVEMGK
WIEDLNMAIEMTKKSQEKSDLFLDPGLCDRSNRSSDEVSLDQESEDDMSSSRNSLDKQTH
HRANSTMHVCWHRNTSVSMSDHSLAVENQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFYK
THQDDFPLASLPLLGYTVSSPGESDSIHKEYVFKLHFKSHVYFFRAESEYTFERWMEVIK
SAASATGRMSLLIPKGPLQMNGN
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatggagggctcctacagggccatacagacccctggcacccggctgggggcc
cagttcaatgctgggatcagtaccttggagccgggccagagcctcagtaatgccttgggc
cccgggggtaggagcccaggcagaggactacagctcagggtccagggcctggacgactcc
caggagttttacgacttggagtccagagctgacggacagactcttctctctgatgtgttc
cggaggagcaacctaatggagagcgattactttggcctagagttccagaacatgcaaatg
agctgggtttggttggaacccacgaagcttgttgtgaaacaagtgaagagacccatgaac
accctcttcaggctgtccgtgaagttctttccccctgaccctggtcagctgcaggaagag
tacactaggtacctgttctccctgcagatgaagcgagacctgctagagggcaagttgagc
tgtacagaaaacaccgcttccctgctggcctcacatctccttcaatcggagataggggac
tatgacgacatggcggacagggacttcctgaagctgaacaagctgctgcccaatcaggag
aggatacaggagaggatcatggaactgcactacagacacctcgggcagactccagccgac
tcagactttcaggttctggagatcgcccgtaaactggagatgtacggcgtccgtttccac
ccagcagccgaccgcgagggaacgaagatcaacctggccgtggctcacataggcctgcag
gtcttccagggtaacaccaaaataaacaccttcaattggtccaagatccgaaaactgagc
ttcaagaggaaacgcttcctgatcaagctatacccagaggttcatgggcctcatcaggat
accctggagtttcagatggtcagtcgggaccagtgcaagatcttctggaagaattgtgtg
gaacatcactcgttcttccgcctcttggatcagccgcagcccaagtccaaagccattctc
tttagtaggggatcgtcgttcagatacagtgggaggacccagaagcaactagtggaatat
gtcaaggacagcggagcaaggaggacaccatatcagaggaggaacagtaaggtgaggatg
tcggctcgctccctggccctcgatgtgccaaaacagacgttctcgttcaatgacagcctg
cgggcgccaggttccccatcctctgcgaccgggtccttccactccatacaagtctccagc
tcccccccacgtccggagccccaggcacagtctatacagcctcctccccagagccaggcc
cagtctacacagcctcctccccagagccaggcccagtctacacagagccaggcccagtct
acacagcctcctccccagagacaggcccagtctacacagcttcctccccagcagcaacag
acccagctcctgcccccacagctggccaggccctccagccccccagcgaaggaggacccc
cacaaggccaccgacatccccccatgtcaccacgccttctcacaagggtcctctatggac
agcccccagctctccccgttcaactccaagagctctcccctctgcctgtccccttccttc
cagatgtctacgctgagtctccctggggcaggccaggctccctcgcccctacagagcccc
atcctgagtgaggtgggcaccaacaggctagaggaggaggaggaggagggcaggaggaag
cgatatcccactgacaaggcctacttcattgccaaagagattctaaccacagagaggacc
tacctgaaagacctagaggtcatcacagtgtggttccgcagcgcggtgatcaaagagaac
gccatgccagaggggctgatgaccctgctgttctccaacatcgaccccatttacgagttc
caccgggggttcctcaaggaggtcgaccagagactagctttatgggaggggcgctctaac
gctcatgtgaagggagactaccagaggattggagacgtcatgctgaggaacatgtgtgct
ctcaaggagttcaccaactacctgcagaaacatgacgaggtgctcaccgagctggagaag
gccaccaagcgcctgaagaagctggagacggtgtataaggagtttgagcttcagaaggtg
tgttacctgcctctcaacacgttcctgctgaagcccatccagcgcctcatgcactacaaa
ctgatcctagagagactgtgtaaacactacagcccagaccaccccgaccacaacaactgc
agagaggccctgaaggaggtggcagagatgaccaatcagctccagagtagtttgatccgt
ctggagaacttccagaagctgtccgagctccagagagacctgatcggcatcgagaacctc
actgcgcctggcagggagttcattcgagagggttgtctgtacaagctgaccaaaaaaggg
ctgcagcaaaggatgtttttcctgttctccgaccagctcctgtacacgagtaaaggtgtg
acggccaccaaccagttcaaggtccatggccagctgcctctgcacggcatgatcctcata
gttttggaggccccggtggaagagagtgagaatgagtggtctgttcctcactgcttcacc
atctactctgcccagaggaccattgtggtggcagccagctcgaaggtggagatggggaaa
tggatagaggatctcaacatggcaatagagatgaccaagaaatctcaggagaaatcagac
ctgttcctggacccggggctgtgtgatcgctccaacaggtcgtcggatgaggtttctctg
gatcaggagtcagaggatgacatgtcgtcgtcccgtaactctctggataagcagacccat
catcgtgccaacagcaccatgcatgtctgctggcatcgcaacaccagcgtgtccatgtca
gatcacagcctggctgtggagaaccagctctcaggttacctcctacgtaaattcaagaac
agcaacggctggcagaagctctgggtggtcttcaccaacttctgtctgttcttttacaag
actcaccaggatgatttcccgctggccagcctcccgttgctaggttacaccgtgagcagc
ccgggagagtcagacagcatccacaaggaatacgtgttcaaactgcacttcaagtcccac
gtctatttcttccgggcggagagcgagtatacattcgagagatggatggaggtgattaag
agtgcggccagtgctactggcaggatgagtctgctcatacctaaaggtcccctgcagatg
aatgggaactaa
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