Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409604
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Entry
139409604 CDS
T10872
Name
(RefSeq) sex comb on midleg-like protein 2 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139409604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139409604
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
139409604
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
139409604
NCBI-ProteinID:
XP_071011117
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All DBs
Position
5:97987445..98030374
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AA seq
696 aa
AA seq
DB search
MGRTSVKDQKEKAGSLFPPGPTPAKESFSWEEYLKETSSTPAPPSFFRQSRVPPSNDFKV
GMKLEVHDPRNSTSVCIATVMGMTGVRLRLRLDGSDNTNDFWRLVDSSDIQPIGTCEKNG
DMLQPPLGFRMNASSWPMFLLRTLNGAEMAPATAFKKEPPPLSQNNFKPGMKLEAVDKKN
PYLICPATIGEVKGEEVFVMFDGWRGAFDYWCQHHSRDLFPVGWCSVTKHSLQKPGNSVN
LPKNLHVLTAAHTPSKPSRRSMPAPFRLPSPLPPLPVRKGVRGRRPKSETIALLKAVAEA
AAAQNGTAPTSNSLLAPRPHKKRGPKPGSKRKPKVLQNLVSSGAADGKLSGGQQDCFSSV
VSTVCVYVNKHGTCGPHLDRKQMQRLPDHFGPGPVNAVLQQAVQTCLDCCYQPKVLLRTL
QAHAGGGEVVSVRMDGGVRLVKLPSASSASFVLRFLETLCRTLQSHFLFSSQPFSNIYTY
SKYVKEEALEAPSLSQGMKRLSRDASPYAAPLSPKLLRTEAHLSEADTLPHEENSLLKEQ
CFMDSNSMMLRSTSDYHSQASSPYYPCHGPERAHSTPLHRLASNPADLPCTHTNRGVEAA
SSTTGPEPTGPDTQTPRGAGLGRNPSTWSIDEVMQFVSDADSSALAPHAELFRKHEIDGK
ALMLLRSDMVMKYMGLKLGPALKLCHHIERLKQGKL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggacatcagtcaaagatcagaaggagaaagcaggaagtctctttcctccaggt
cccactcctgctaaagagtcgttcagttgggaggagtacctgaaggaaacatcatctacc
ccggctccacctagcttcttcagacagtccagagtccctccctccaatgacttcaaggtg
gggatgaagctggaagtccatgaccctcggaactccacctctgtgtgcatcgccactgtg
atgggcatgacgggtgtgcgtctgcgtcttcgtctggatggcagtgacaacaccaatgac
ttctggaggctggtcgactcctcagacatccagcctataggaacctgtgaaaagaatggg
gacatgctgcagccgccgctgggcttcagaatgaacgcgtcttcctggcccatgtttctg
ctgagaaccctgaatggagcagagatggccccggctaccgcttttaaaaaggagcctcca
ccactgtcccagaataactttaagccagggatgaagctggaagcagtagataagaagaac
ccctacctcatctgccctgctaccatcggagaggtgaagggggaggaagtgtttgtgatg
tttgacgggtggaggggggcgtttgactactggtgtcaacaccactctagagatctcttc
cctgttggatggtgctccgttaccaaacacagcctgcagaagcctggcaacagtgtcaac
ctgccaaagaacctgcatgtcctaacagcagcccacaccccctccaagcctagccgtaga
tccatgcctgcgcccttccggcttcccagccccctgcccccgctgcctgtcaggaagggg
gtgcgggggcggcgccccaagagtgagaccatcgccctgctgaaggctgtagcggaggca
gctgcagctcagaacggcacggctccaacctctaactcactgctggctcccaggcctcac
aagaagagaggccctaaacctggcagcaagaggaagcccaaggtgctccagaacctagtc
tcttcaggtgctgcggatggcaagctgtcagggggtcaacaggactgcttcagctctgtg
gtctctacagtgtgtgtgtatgtgaacaagcatgggacctgtgggcctcacctggacagg
aagcagatgcagcgtcttccggaccactttgggccaggtcctgttaacgcggtgctacaa
caggcagttcagacttgtctagactgttgttaccaaccaaaggtgctgctcagaactcta
caggcacacgctgggggaggagaggttgtcagtgtgaggatggatggtggagttcgtctg
gtgaagctgccctcagcctcaagcgcctcctttgtgctccgcttcctggagacgctgtgc
cgcacgctgcagagtcatttcctcttcagctcccagcccttcagcaacatatacacctac
agtaaatatgtgaaggaggaggcgttggaggccccatcactgagccaggggatgaaacgt
ctatctagagacgcatccccctacgcagcccccctttcccctaaactactgcgcaccgag
gcacacctttcagaagcagatactctgccccatgaggagaacagccttctgaaggagcag
tgcttcatggactctaactccatgatgctgcgcagcacctctgactaccactcccaggcc
agcagcccctattacccatgccatggccccgaacgcgcccacagcacgccactgcaccgc
cttgcctccaaccctgcggacctcccctgtacacacaccaacagaggagtggaagccgcc
agctccaccacgggccccgagcccacgggccctgacacacagacccccaggggggcgggg
ttgggcaggaacccctctacctggtccatcgatgaggtcatgcagtttgtgagcgacgcc
gactcctcagccttggccccgcacgctgagctgttcaggaaacacgagattgacggcaag
gccctgatgctgctgaggagtgacatggtgatgaagtacatgggtctgaagctggggccc
gccttgaagctgtgtcaccacatagagcggctgaaacagggcaaattgtag
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