KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409641
Entry
139409641         CDS       T10872                                 
Name
(RefSeq) interleukin-1 beta-like
  KO
K04519  interleukin 1 beta
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010  MAPK signaling pathway
ocla04060  Cytokine-cytokine receptor interaction
ocla04217  Necroptosis
ocla04620  Toll-like receptor signaling pathway
ocla04621  NOD-like receptor signaling pathway
ocla04623  Cytosolic DNA-sensing pathway
ocla04625  C-type lectin receptor signaling pathway
ocla05132  Salmonella infection
ocla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    139409641
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    139409641
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    139409641
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    139409641
   04621 NOD-like receptor signaling pathway
    139409641
   04623 Cytosolic DNA-sensing pathway
    139409641
   04625 C-type lectin receptor signaling pathway
    139409641
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    139409641
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139409641
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ocla04052]
    139409641
   00536 Glycosaminoglycan binding proteins [BR:ocla00536]
    139409641
Cytokines and neuropeptides [BR:ocla04052]
 Cytokines
  Interleukins
   139409641
Glycosaminoglycan binding proteins [BR:ocla00536]
 Heparan sulfate / Heparin
  Cytokines
   139409641
SSDB
Motif
Pfam: IL1
Other DBs
NCBI-GeneID: 139409641
NCBI-ProteinID: XP_071011162
LinkDB
Position
5:complement(16388592..16390420)
AA seq 295 aa
MELKLADALPSSYSESMEFDAECCLPGAKGGPEMELHKGLTFDLEVIQQHQVGMRQVAHL
VMVLHRMKHTFQKSDSTHTPLGMECTDDQLSGIIMDNLLEECVMERVQEPEGAVDKKAEG
TFKRLDSPRQCTLCDSYQKSLVHNPETMVLCAVTLRGGIDHQRDRLTAKLHCKHTTFNLS
MYNINMKNSHTIQAQPVALRIASSDFNLSCSKQTDSTAPILQLERSSDDQLRTISAQGDT
ARFLFYMTTKGISLTTFESAKYPDWFISTSLEQRQPVAMCQKEDLRKLTNFYDNN
NT seq 888 nt   +upstreamnt  +downstreamnt
atggagttgaaattggccgatgctctgccgagctcttattcggagagtatggagtttgat
gcggaatgctgcctgcctggtgcgaagggtggaccagagatggagctgcacaagggcctg
acctttgacctggaggttatccagcagcatcaggtaggcatgagacaggtggctcacctg
gtgatggtgctgcacaggatgaaacacacctttcagaagtccgactccacacacactccc
ctgggcatggagtgcaccgacgaccagctttcaggcatcatcatggacaacctgttggaa
gagtgtgtgatggagcgggtccaggagccagagggagcggtggataaaaaggctgagggg
accttcaagcgactggacagccccaggcagtgcaccctgtgtgacagttaccagaagagc
ctggtgcacaaccctgaaaccatggtgctatgtgccgttacactgcggggcggcatcgac
caccagagagataggctaactgccaaactacactgcaagcacacgacgttcaacctctcc
atgtataatattaatatgaagaactcccacactatccaggcccagccagttgccttgagg
attgccagtagcgacttcaacttgtcctgctccaagcagacagacagcacagctcccatc
ctacagttggagcggagttctgacgaccagttgaggaccatcagcgctcagggagacaca
gcccgcttcctcttctacatgacaaccaaaggcatctccctgaccaccttcgagtcggcc
aagtaccccgactggttcatcagcacctcactggagcaacgccagcccgtagcgatgtgt
cagaaagaggacctcagaaagctcaccaacttctatgacaacaactaa

DBGET integrated database retrieval system