Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409644
Help
Entry
139409644 CDS
T10872
Name
(RefSeq) laminin subunit gamma-3-like
KO
K06247
laminin, gamma 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510
Focal adhesion
ocla04512
ECM-receptor interaction
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139409644
NCBI-ProteinID:
XP_071011165
LinkDB
All DBs
Position
5:complement(19101835..19294578)
Genome browser
AA seq
1652 aa
AA seq
DB search
MDTPLTTPLLLTLLLRSLSLIHGAMDSCYDDNEGVPSRCMPKFENAAFNRTVMASNVCGS
PTEDYCMQTGSTRSCHHCRVSDPGLSHNASLLTDFHTDEEPTWWQSQSMFYGVQHPNSVN
LTLHLSKAFEITYVSLKFYTSRPESFAIYKRTSEDGPWIPYQYYSASCTKTYGKNNKGYI
RPGDDERMAVCNDEFSDISPLIGGNVAFSTLEGRPSAYNFDQSAVLQEWVTATDLLISLD
RLNTFGDEFFKDAKVLRSYFYAISDFSVGARCKCNGHGSECVLDEQGALVCDCQHHTVGV
DCQRCHPFYQDRPWARATGDSANQCMKCNCSGQADVCVFDAEQYRSTASGGRCVDCRDQT
DGPHCERCRENHYRRSPQDPCSPCDCNTMGSVSLQCGVEGKCECRPSVSGVKCDTCQPGF
HSLRPGGCRLCDCDRRGSVGVCSVLDGGCHCRVNVEGQACDRCKPGSFNLQENNPAGCTP
CFCFRHSLACRSSNHHAAVNITSDFLEDTDGWSGQFSGGQEYPLLWKEGDVYLLPLSEDD
LGFYSAPERFLGNHLLSYGQLLSLTFTAEAQYLLPHSATVLLEGSGITLSADLSPQHGPV
HQSGLAPQHTFTLRLHKEETRLKPSLSAFQFHHLLINLTAIQISNAGGHNYTSQLSGVTL
ASAAPFSSPVIPSTPPALWVEVCTCPPGFGGQFCELCAPGFSREVPNGGPLSPCVPCTCH
QHGPCHPETGVCVCIDFTTGPTCERCLGGYYGNALIGTPNDCRPCPCPDRTSCAQMSSGE
VVCTNCPSGQRGIRCEMCEDSFHGDPLGRSGPVQPCEKCDCNDNVDPNALGVCDHMTGCC
LKCLGHTEGDHCQRCRQGYYGDALDRTVAQKCKRCGCSPAGTSGSLEDCDPQTGSCLCLS
HVTGRDCGQCEVGFFNLQSGVGCERCTCNPIGSSSMACHQITGQCVCRLGLEGRLCSTCR
MGFYGFSSRGCRACNCDPMGSSSMQCHTNGTCPCRQGFVGYKCDQCELNYFHNRATHQCE
ECHVCYGLVKEQAGRLKARLQDLENLLASFDCRCGYGNHHVREYHMRQLHERQHHERGHQ
AEDSLPNALEDFLAIQEAKEALVKQFALMETSTRTLSAQLHNVTPAMNCSASMEKEQEEE
KKEKGKEDGRGTLCSTLGDALSVVRSAQTQLKQATLDLDNMVIPFEVPLVPNRWNSAVNQ
SEVLMKSHTEMSGRIESIATKAFMASNQTYSLLMDLLEDNSTKEYISNLTEQLADMQQIK
ENLTAQVNRTLANQLSLEEESADVLVALGNLTSSLLELSQRRPKSTSGTNQSDLRPTQGY
NQSDPSLVPAANQSEDVELSNRTAELAFNVQSKEELVNKIREEMEPRIQTAHNKMAAVKD
IYKLTAHAQGSKVLALSSVVTGKEMESEVIALRRELEDMQREWPRRQVQTKAALKKETLL
REKVLEDINKKVNQTERVLRPALDSATLSNATAGQAEHTAHSLSKEAKATLTKAKHARTA
SAQLSSSVDTAMQQLAELENHTAQAQAQLNAKPVESLTSVKGDIQAAKFQLEAYSLTLTQ
LISNMDGSMVLEQFDRILSETVVRLGVLRGCVESLALNVKIQTLWSAAQDQKSQLTHLEQ
DLQEIRQERDSLKDIALHLPQTCPQASGIEGH
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggataccccactgaccaccccactcctactcaccctcctcctccgctccctctccctc
attcatggggccatggactcctgctacgatgacaacgagggtgtcccaagccgctgcatg
cccaagtttgagaacgcagccttcaaccgcacggtcatggcctctaacgtgtgcggttcg
cccacggaggactactgcatgcagacgggctcgacgcggtcctgccaccactgtagagtg
tcggacccgggcctcagccacaacgccagcctgctgacggacttccacacagatgaggaa
cccacctggtggcagagccagtccatgttctacggagtccagcaccctaactctgtaaac
ctcaccctgcacctcagtaaagcctttgagatcacctacgtgagcctgaagttctacacc
agtcgaccggagagctttgccatctacaagcgaacaagtgaggatggaccatggatcccc
taccagtactacagcgcctcctgtaccaagacctatgggaagaacaacaagggatacatt
cgcccgggggacgatgagaggatggcagtctgcaacgacgagttcagtgacatctcccct
ctgatcggtggcaatgtggccttctctaccctggagggacgacccagcgcatacaacttt
gaccagagcgccgtgctacaggagtgggtgacagccactgacctgctcatctctctggac
aggctcaacacattcggagatgagttcttcaaggacgccaaggtgctgcgatcctacttc
tacgccatctccgatttctccgtaggcgccaggtgtaagtgtaatggccatggcagtgag
tgtgtgttggacgagcagggggctctggtgtgtgactgccagcatcacactgtcggggtg
gactgccagaggtgtcacccattctaccaggacaggccttgggccagggccaccggagac
tctgccaaccagtgtatgaagtgtaactgcagtgggcaggcggatgtgtgtgtgttcgat
gcggagcagtaccgaagcacagcaagtggggggcgctgtgtagactgtagggaccagact
gatggaccgcattgtgaacgctgtagagagaaccactaccgacggtcaccacaggacccc
tgcagcccctgtgactgtaacaccatgggttctgtgagtctgcagtgtggtgtggagggg
aagtgtgagtgcagacccagtgtgtcaggggtgaagtgtgacacctgtcaacccggtttc
cactccctcagacctggcggctgcaggttgtgtgactgtgaccgtaggggcagtgtgggc
gtctgctctgtgctggatggtggctgtcactgcagggttaacgtggagggacaggcttgt
gacaggtgtaagccaggctccttcaacctgcaagagaacaatccagctggatgtacgccc
tgtttctgcttcagacactcattggcctgcagatcgtccaatcaccatgcagctgtcaac
atcacatcggactttcttgaagacacagatggctggtcaggacagttttccgggggacag
gagtatcctctgctgtggaaggaaggggatgtctacttgctaccactcagtgaggatgat
ctcggcttctacagcgctccagagaggttcctggggaaccatctcctgagctacggccag
ctcctttccctgaccttcacggccgaggcccagtacctcctccctcacagtgccacagtg
ctcctggaaggatcgggaattaccctgtcagctgacctttcaccccaacatggacctgtc
caccagtcgggccttgctccccagcacaccttcactctcagacttcacaaggaggagacg
aggctgaagccttcattatctgccttccagttccaccatcttctcatcaacctcactgct
atacagatcagcaacgcaggaggacacaactacacgtcccaactctcaggggtaaccctg
gcttccgctgcccccttctccagtcctgttatcccctctacccctcctgcactctgggta
gaggtgtgtacatgccctcctggatttgggggtcagttctgtgagctctgtgccccagga
ttcagcagagaggtccctaacggaggacccctgtctccctgtgtgccttgcacctgccac
cagcatggaccatgccaccctgagacaggtgtgtgtgtgtgtatcgacttcaccacagga
ccaacctgcgagcgttgtctgggcggttactatggtaacgcgttgattggcacgcccaat
gactgcagaccttgcccctgcccggaccgtaccagctgtgctcaaatgagctctggggag
gtggtctgtaccaactgcccttcaggacagaggggcatcagatgcgagatgtgcgaggac
agtttccacggcgaccccctgggccggtcagggccggttcaaccgtgtgagaagtgcgac
tgtaacgataatgtggaccccaacgcgctgggcgtgtgtgatcacatgacgggctgttgc
ctgaagtgcctgggacacaccgagggagaccattgccaacgctgccgacaaggttactat
ggggacgccctggaccgcactgtggctcagaagtgcaaacgctgcggctgcagtcctgca
gggacttctggatcgttggaggactgtgacccccagacaggaagttgtctgtgccttagt
catgtgaccgggcgagactgtggtcagtgtgaggtgggcttcttcaacctgcagtctgga
gtaggctgtgagaggtgcacctgtaaccccattggctcatcatccatggcttgccaccaa
atcacaggccagtgtgtgtgtcggctgggactggaggggcggctgtgcagcacatgtcgt
atgggcttctatggtttctcctcacggggctgcagagcctgtaattgcgacccaatgggt
tccagctccatgcagtgccacaccaacggcacctgtccctgccgccagggcttcgtgggg
tacaagtgtgaccaatgtgagctcaactacttccacaacagagccacacaccagtgtgag
gagtgccacgtctgctatgggctagtcaaggagcaggcagggaggctgaaggctcggctg
caggatttggagaatctcctagcaagcttcgactgccggtgtggctacgggaaccaccat
gtgcgggagtatcacatgcgacagcttcacgagcgacagcatcacgagcgtgggcatcag
gcggaggacagcctgcccaatgcgctggaggacttcctggctatccaagaggcaaaggaa
gccttggttaaacagtttgctctcatggagacgtctacacgcactctctcagcccagctg
cacaatgttaccccagctatgaactgtagtgccagcatggaaaaagagcaggaggaggag
aaaaaggagaaggggaaggaggacgggcggggaacattgtgtagtacccttggcgacgct
ctatcagtggtcagaagtgcacagacacagctgaagcaggcaacactggacctggacaac
atggtcattcctttcgaggtgccactggtgcccaaccgatggaactcagcggtgaaccaa
tcagaggtccttatgaaaagccacacagagatgtctggtcgtatagagtctatagctacc
aaggcattcatggcctccaaccagacctattctctactgatggacctactggaggacaac
tctacaaaggaatacatcagcaacctcacagagcaactggcagacatgcagcagataaag
gagaatctgactgcccaagtgaataggactctagctaatcaattgtctctggaggaggag
tctgctgatgtcttggttgccctaggaaacctcacctcctccctattggagctatcccag
aggaggcccaaatccacatcaggaaccaaccaatcagatctcagaccaacacagggttac
aaccaatcagaccccagcctcgtaccggctgctaatcaatcagaggatgttgagctaagc
aacaggacagctgagctggcgtttaatgtccagtctaaagaggagctggtcaataagatc
agagaggagatggagcctcgcatacagaccgctcacaacaaaatggctgctgtaaaggat
atttacaagctgacagctcatgcccaggggtcaaaggtcctggccctgtcatcggtggtg
acagggaaagaaatggagtcagaggtcatcgccctgcggagagaactggaagacatgcag
agagagtggcctcgaaggcaggtccagaccaaggctgctctgaagaaggagacgttgctg
agggagaaggttttagaagacatcaataagaaggtgaaccagacagagagagtcctgagg
cctgccctggatagcgctaccctctccaacgctactgcaggacaggcagaacacactgca
cattccctgtctaaagaggccaaggccaccctgaccaaggccaagcatgcaaggacagcg
tctgcccagctcagctcctctgtggacacagccatgcagcagctggctgagctggagaac
cacactgcccaggcacaagctcaactcaacgcaaagcctgtagagtctctgaccagtgtg
aagggggacatccaggcagctaagtttcagctggaggcctattcactcacactcacccag
ctcatcagtaacatggatgggagcatggtgctggagcagtttgaccgtatcctgagtgag
acggtggtgcggttgggtgttctgcgtggctgcgtggagagccttgccctgaacgtgaag
atccagaccctatggtcagctgcccaggaccagaagagccaactgacccacctggaacag
gacctgcaggagataagacaggagcgagacagtttgaaggacatcgccctgcacttgccc
cagacttgcccccaggcctcggggatagagggacactag
DBGET
integrated database retrieval system
