Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409689
Help
Entry
139409689 CDS
T10872
Name
(RefSeq) rabphilin-3A-like
KO
K19938
rabphilin-3A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139409689
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139409689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
Ribosomal_L37ae
RIM2a_ZnF
SH3_14
Motif
Other DBs
NCBI-GeneID:
139409689
NCBI-ProteinID:
XP_071011197
LinkDB
All DBs
Position
5:complement(40440312..40473569)
Genome browser
AA seq
758 aa
AA seq
DB search
MNDAAYRSPIQRSNIHGRRKGLSGYVQLGIQGSILKALIGPRVNEDPERFRLLSPQQNGM
KRGASKESKKALHMAHQSTHSYHCIGSGSGGSAVFGNSRGRSVASDSLGNKIVGDFQDDS
EARWNPWTCRSVSRMHRHSGSHGGGGPQEVELTDEEKEIINSVLARAETMEAMEQERIGR
FATRLDSMKKTACGDGHSRCLLCGETFGQQGVNSVLCSHCKKHMCSKCGIQNNSRSSCPV
WVCRICSEHKEMLKRSGAWFFKGQPQKVLPAPLPISRPRGTGRESPRTLNPTHHQPSTQP
YARTQTQPIYKPDAGAQDCTEQQEQQGNCCSNTENQEPTDEPPYSSSEQQDPEGYSSAQT
LGGVAVQEEMVKNQSKLGSRPPTARGRENTPAPADSVTPQAPAPEESRHPHQREDRAPTP
VGEEKPTPAPKPTLAARPAPAPVEDDDNEYDSDESTTLGLLEFTLHYEQESNALHCNIVK
AKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLKGTLNPVWNETLVYHGITDDDMQR
KTLRLSVSDMDKFGHNEFIGETRVALKKLKANQKKNYSVCLERVVQVKKAGTGGSARGMA
LYEEEVKEDAEERGRILVSLTYSTQQGRLIVGVVRCAHLAAMDSNGYSDPFVKIFLKPDM
GKKAKNKTQIKKKTLNPEFNEEFSYEIKHGELAKKSLDISVWDYDMGTSNDFIGGCQLGI
TAKGECLKHWYECLKNKDKKIERWHVLLDDNTVKDTDD
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgcggcctatagatcgcccatccagcgctctaacatccatgggagaagaaag
gggctgagtgggtatgttcagctcggaatccagggtagcatcctaaaagctctcatcggt
cccagagtcaatgaggacccggagagatttagactgctttctccacagcagaatggcatg
aaaaggggtgcgagcaaggaaagcaagaaagctctccatatggcccaccagagtactcac
tcctaccattgcataggctcaggaagcggtggctcagccgtcttcggcaactctcgggga
aggtcggtagcctcagattctctcggcaacaagatcgtcggggacttccaggatgactcg
gaggcaagatggaatccctggacgtgcaggtcagtcagcaggatgcaccggcacagtgga
agccatggaggaggaggtcctcaggaagtggagctaacagacgaagagaaggagatcatc
aacagtgttctggctcgggctgagaccatggaggccatggagcaggagaggatcgggcgt
tttgccactaggttggacagtatgaagaagacagcatgtggagatggtcactctcgctgt
ctgctgtgtggagagacgtttggccagcagggagtcaactccgtactctgttcccactgc
aagaagcatatgtgcagtaagtgtgggattcagaacaacagccgctcgtcatgtcctgtg
tgggtctgtaggatctgcagcgagcacaaagagatgttgaagcgttctggagcgtggttc
tttaagggccaaccccagaaggtcctccctgctcccctgcccatctccaggcccagaggg
acaggtagagagagcccccgtaccctgaaccccacccatcaccagcccagtacccagccc
tatgcccgtacccagacccagcccatctacaagccagacgctggtgcccaggactgcaca
gagcagcaggagcagcagggtaactgctgctccaacacagagaaccaagagcccaccgat
gagcccccgtactccagctcagagcaacaggacccagaggggtatagctctgctcagaca
ctagggggcgttgctgtgcaggaagagatggtgaagaaccagtctaagttaggctccaga
cctcccacagccagggggagagagaacacaccagctccagctgactcagtcacaccacaa
gcccctgcgcccgaggagagcagacaccctcaccagagggaggatagagccccaactcca
gtcggggaggagaaacccactcctgcccccaaacccaccctggcagcacgcccagccccc
gctcctgtcgaggacgatgacaacgaatatgactctgatgaatccaccaccctggggtta
ctggagttcactctgcattatgaacaggagagcaacgcgctgcactgcaatatagtcaaa
gccaagggcctaaagccgatggactctaatggcctagcagacccttacgtcaagctgcac
ctcttacctggagccagtaagtctaacaagctgcgtactaagacactgaagggcactctg
aacccagtgtggaatgagactctggtgtaccacggtatcactgacgacgacatgcagcgc
aaaacgctacggctgtcagtgagtgatatggacaagtttgggcacaatgagttcatcgga
gagacgcgtgttgctctgaagaaactcaaagccaaccagaagaagaactacagtgtgtgt
ctggagagggtggtccaggtgaagaaggcaggaacaggaggctcagcccggggcatggca
ctctacgaggaggaggtaaaggaggatgcagaggagaggggtcgtatcctggtctctcta
acctacagtacccagcagggtcgtctgatagtgggagtggtgcgatgtgctcacctggca
gctatggactctaatggatactcagaccccttcgtcaagatcttcctgaaaccagacatg
gggaagaaagccaagaacaagactcagataaaaaagaagacgctgaacccagagttcaac
gaggagttcagctatgagatcaaacatggtgagctggccaagaagagcctggacatctca
gtctgggactatgacatgggaacatccaatgatttcattggagggtgccagctgggcatc
acagccaagggggaatgtctgaagcactggtacgaatgtctgaagaacaaagacaagaag
attgagcgctggcacgtcctcctagatgacaacaccgttaaagacacggacgactaa
DBGET
integrated database retrieval system
