Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409780
Help
Entry
139409780 CDS
T10872
Name
(RefSeq) calcium-activated chloride channel regulator 1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139409780
Ion channels [BR:
ocla04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
139409780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA
VWA_2
fn3
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
139409780
NCBI-ProteinID:
XP_071011258
LinkDB
All DBs
Position
5:82896038..82906496
Genome browser
AA seq
907 aa
AA seq
DB search
MASKAAAVLLLVYLSGSTFGIKLTGNGYTDILIAINPEVPEDPVLITQIKEMFKEASKHL
LNATKKHLYFKEVAILVPPNWNKGNYPKAKTEVYDKANIIIDGPNKLHGDQPYTLQYGEC
GSEGRYIHLTPDFMLNDDVSKYYGPRGKVFVHEWAHLRWGVFDEYNEEKPFYLSGSIIEA
TRCTINITGKYIHKHDQRDCTTDPVTGLYTEDCVFYPDKQQTTSASIMYNQGLSAVKEFC
TKETHNTEAPNIQNRLCGNIGVEEVITSLSVDAGVAVVPTPPSILPTFTVVQCRQRVVCL
VLDVSGSMAAGSRMLNLRQAATLFIQKIVEDQAYIGIVQFTATATILEPLTLIDGEASRD
KLVGSLPLSAGGYTDICAGVKKGLEVLGGDGDGAMGDAIILLTDGESSINCQKSVNESGA
TVHTITLGPNANIDVKELSDISGGKYHNAADGVDSNDLVDIFTSHTTSDGNLTKQTIQLE
STGLNMIGWFNGSVSIDRTIGNKTSFLVIYERSPPDILVLSPFTRTYDTSHFKHDAPAKT
LTLDIEGTAETGKWKYSLLNKESTAQSMSMTVTSRAVSDAIPPVMVKTHMSQQFSNGSKP
MLVYAEVNQKGVPVILADVMATLKSDSGDQYKLQLLDNGAGADAFRNDGIYSSYFTELTT
GKYSLKVKVHNNDGMARFSLRRHSGALYIPGYVVNGQVVMNPPKPPISEDDLQADVGSFT
RTVIGESFSVSLPPGVPPPNFPPNKITDLNAEIEEDKVLLTWTAPGEDMDQGTATAYEIR
FSEDSDLLRSNFSTAHLVTYDLSPKKAGSPEKLSFTLFSIIKNGTTLFFAAKAEDKSFLK
SETSNIIQVTKIVPKAPVPSPTDAPDTSGSGVNIAAIVISVTTVTMVACLIASVTMCSIK
SRRVNHA
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagcagcagctgtgttgctgctggtttacctgtcaggatctacatttggg
atcaagctgactggaaatggatacactgacattctgattgctattaaccctgaggtgcct
gaggacccagtgctcatcacacaaatcaaggaaatgtttaaagaagcctccaaacatcta
ctcaatgcaacaaagaaacatttatatttcaaggaagtcgcaatattagtgccacctaat
tggaataaaggaaattaccccaaagcaaagacggaggtctacgataaggccaatataata
attgatgggccaaataaattacatggagatcagccttacactctgcagtatggtgaatgt
ggatctgagggccggtacattcatttgactcctgacttcatgctgaatgatgatgtctct
aaatactatggacccagaggtaaggtttttgtccatgaatgggcacatctaagatgggga
gtttttgatgaatataatgaagaaaaaccattctacctgtcaggttccataatcgaggca
acaagatgtaccataaacattacaggaaagtacatccacaaacatgaccaaagggactgc
accactgaccctgttactgggttatacaccgaagactgtgtattctatcctgacaagcaa
cagacaacctctgcatctatcatgtacaatcaaggccttagtgctgtaaaagagttctgt
acaaaagaaactcacaacactgaggctccaaacatccagaacagactgtgtggtaacata
ggtgtagaggaagttatcacttcactttctgtagatgccggtgtggcagttgtgccaaca
ccaccaagtatactacccacattcactgtggtgcagtgccggcaaagggttgtctgtctt
gtccttgatgtttcaggaagcatggctgcaggttctagaatgttgaacctgagacaagcg
gcaacgctcttcatacagaagattgttgaagaccaagcttatattggcattgtacaattt
acagctacggctacaattcttgaaccattgactttaattgatggtgaagcgtcgagagat
aagcttgtaggcagtctgccgctatcagctggtggatacacagacatttgtgcaggtgtt
aagaaaggtctggaggtacttgggggagatggagatggtgcaatgggagatgcaatcata
ttactaactgatggggaatcaagtatcaactgtcaaaaaagtgttaatgaaagtggtgca
actgtgcacacaataactcttgggccaaatgcaaacatagatgtaaaagaattgtcagac
atatcaggtggtaaatatcacaatgctgctgatggtgtggattccaatgaccttgtggat
atttttacttcacacacaacatctgatggaaatctgaccaagcagacaatccagcttgag
agcactggattgaatatgattggttggtttaatggatctgtatccattgacaggacaatt
ggaaacaagacaagctttttagttatctatgaaagaagtccacctgacatccttgtttta
agcccctttacacggacctatgacacatcacatttcaaacatgatgctcctgctaagact
ttaacgctcgatattgaaggaactgctgagactggaaagtggaaatacagcctactaaat
aaagagtcaactgcccaatctatgtcaatgactgtgacaagtcgtgctgtcagtgatgct
ataccaccggtcatggtcaaaacccacatgagccaacagttcagcaacggcagcaaaccc
atgttggtgtatgcagaggtcaaccagaaaggtgttccagtgattctggcagatgtgatg
gccacactgaagtctgattctggggaccaatataagctacaactgctggataatggagca
ggtgctgatgctttcagaaatgatggcatctattccagttacttcactgaactaacaaca
ggaaaatacagcttgaaagtgaaagtacataacaatgatggcatggccagattctccctc
aggagacacagtggagcactttacatacctggatatgtggttaatggacaagtagtgatg
aatcccccaaagcccccaatcagtgaggatgacctgcaggctgatgttggcagcttcacc
aggacagtcataggagagagcttctcagtcagtctcccacctggtgtcccccctccaaat
ttcccccctaacaaaatcacagacctgaatgcagagatagaggaggacaaagtgctgctc
acctggactgcacctggggaagacatggaccaaggcacagcaacggcctatgagatccgt
tttagtgaagattcagacctactcagatccaacttcagtaccgctcatcttgtcacatac
gacctctcaccaaagaaggcaggctccccagaaaagctctctttcactctcttctcaatc
atcaaaaatggcaccactctgttttttgcagcaaaagcagaagacaaatctttcctgaaa
tctgaaacatccaacattattcaagtgaccaagattgttcccaaagctcctgttccttct
ccaactgatgcgcctgatacatcaggcagtggtgtgaacattgctgctatagtcatatca
gtcaccacagtaacaatggtggcttgtctgattgctagtgtgacaatgtgttcaattaaa
tcaaggagagttaatcatgcttaa
DBGET
integrated database retrieval system
