Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409823
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Entry
139409823 CDS
T10872
Name
(RefSeq) THAP domain-containing protein 1
KO
K23203
THAP domain-containing protein 1/3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139409823
03036 Chromosome and associated proteins [BR:
ocla03036
]
139409823
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2CysHis zinc factors
139409823
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Gene silencing
Transposable elements
139409823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THAP
ADIP
HDV_ag
DUF4140
Spc24
DUF16
fvmX5
MCU
GrpE
FTA4
Mod_r
Exonuc_VII_L
DUF4391
DUF3053
PET
YPEB_N
SlyX
XhlA
Vac_Fusion
NPV_P10
TMP_N
Prefoldin
EMP24_GP25L
Motif
Other DBs
NCBI-GeneID:
139409823
NCBI-ProteinID:
XP_071011310
LinkDB
All DBs
Position
5:complement(3301944..3304698)
Genome browser
AA seq
233 aa
AA seq
DB search
MVQSCSAYGCKNRYHKDRNISFHKFPLARPDVCGKWVAAMRRNNFKPTRYSNICSQHFTK
DCFKPECNNRVLKENAVPSLFCFSKLQVKAESLADPLPPEMDFSLTLPSLPLSDTEETQQ
EIQTETHHTVDPLPLVENLPHSMSISCDHNYTVEDTVQQKKRIEQLEEQLDKLRKKLKTV
QQKCRRQERQLKRFKAIGEFQRMNRDPALGEGYVILPQQLYDALKGIEPVEGP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggtccaatcgtgctcagcttacggatgcaaaaacagatatcataaagacagaaacatt
tcatttcacaagttcccgctagcgcggccagacgtgtgtgggaaatgggttgcagcaatg
aggagaaacaatttcaaaccaaccagatacagtaatatctgctctcagcatttcactaaa
gactgcttcaagccagagtgcaacaaccgagtcctgaaggagaatgctgtaccttctcta
ttctgtttcagtaagctacaagtcaaggcagagtccttggcggacccgttacctccagag
atggacttctctctgaccctcccctccctccccctctctgacacagaggagacacagcag
gagatacagacagagacccatcacactgtagaccccttacccctggtagagaaccttccc
cacagcatgtccatctcctgcgaccacaactacaccgtagaggacacggttcagcagaag
aagaggattgagcagctggaggaacagctggacaagctgaggaagaagttaaagaccgta
cagcagaagtgtcggaggcaggagagacagttgaagaggtttaaggctatcggagagttc
cagaggatgaacagggacccggcgctaggggagggatatgtaattctaccccaacagctt
tatgatgcgctcaaagggattgagcccgtagagggtccatga
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