Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409830
Help
Entry
139409830 CDS
T10872
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic-like
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139409830
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocla01007
]
139409830
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139409830
Enzymes [BR:
ocla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
139409830
Amino acid related enzymes [BR:
ocla01007
]
Aminoacyl-tRNA synthetase
Class II (A)
139409830
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
139409830
Prokaryotic type
139409830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
AsnRS_N
tRNA_anti-codon
tRNA_anti-like
Motif
Other DBs
NCBI-GeneID:
139409830
NCBI-ProteinID:
XP_071011317
LinkDB
All DBs
Position
5:5882522..5897788
Genome browser
AA seq
559 aa
AA seq
DB search
MAEEVTKTTGELSVGELYVSDKEGNDQDGDGTERKPFKTSLRALTFAGKEPFPTIYVDSQ
KEGERWAVISKTQMKNVIKLFAREQMKSDSKDKKEAEDSERREKNLEEAKKITIENDSSL
PEPKTVKIYQLEPLRGERVKVFGWVHRMRKQGKNLLFIVLRDGTGFLQCVLNNKLCQCYN
ALVLSTESTVALYGTVKQVPEGKQAPGGHELHCDFWELVGLAPAGGADNLLNEESDVDVQ
LNNRHMMIRGENVSKILRVRSTVTQCFRDHFFARGYYEITPPTLVQTQVEGGSTLFNLNY
FGEEAFLTQSSQLYLETCIPALGDTFCIAQSYRAEQSRTRRHLSEYTHIEAECPFMTYED
LLSRLEDLVCDVVDRVLKSPAASLLYQVNPDFKPPKRPFKRMNYSEAIIWLKEHDIKKDD
GTYYEFGEDIPEAPERLMTDAIGETILLCRFPAEIKSFYMQRCPEDRRLTESVDVLMPNV
GEIVGGSMRIWDAEELLEGYKREGIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWLLN
RHHIRDVCLYPRFIQRCRP
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaggtaacgaaaaccacaggcgaactctcagtgggtgagttgtatgtgtct
gacaaagaaggaaatgaccaggatggtgacggaacagagaggaagcctttcaagacctca
ttgagggctttgacatttgctggaaaggagccattcccaaccatctatgtggactctcag
aaggaaggagagcgttgggcagtgatctccaagacgcagatgaaaaatgtgatcaagtta
tttgctagagagcagatgaagagcgactccaaagacaaaaaggaggcagaggattctgag
agacgagagaagaacctagaagaagctaagaaaatcaccattgagaatgactccagcctt
ccagagcccaaaacggtcaaaatctatcagctggagcctctccgaggggagagagtgaag
gtgtttggttgggtgcatcgaatgagaaaacaaggaaagaacctgctgttcattgtgctg
agagatggaactggtttcctgcagtgtgttctcaacaataaattgtgtcagtgctacaat
gccctggtgctgtccactgaaagcacagtggctctgtatgggacagtgaagcaagtacct
gagggaaagcaggcccctggtggtcatgagctgcactgtgacttctgggagctggtgggt
ctggcgccggctggaggagctgacaacctgctgaatgaggagtctgatgttgacgttcag
ctcaacaacagacacatgatgatccgtggggagaacgtgtccaagatactccgggtccgc
tccactgtcacacagtgtttcagggatcacttcttcgcccgcggatactatgagatcacc
ccacccactctggtgcagacccaggtggagggaggttccaccctgttcaacctgaactac
tttggggaggaggcgttcctgacccagtcctctcagctctacctggagacctgcatccct
gctctgggagacaccttctgtatcgctcagtcctaccgcgcagagcagtcccgcactcgc
aggcacctgtctgagtacactcacatagaggcagagtgccccttcatgacctatgaggac
ctactgagcagactggaggatctggtgtgtgacgtggtggacagagtcctgaagtcacct
gctgcttctctactctaccaagtcaaccctgacttcaagccccccaagaggcccttcaag
aggatgaactactctgaggccatcatctggctgaaggagcacgacatcaaaaaagatgat
gggacatactatgagtttggagaggacatcccagaggccccagagaggctgatgactgat
gccatcggtgagaccatcctgctgtgccgcttcccggctgagatcaagtccttctacatg
cagcgctgtcctgaggaccgacgcctcaccgagtcggtggatgtgctgatgcctaatgtt
ggagagatagttggagggtctatgaggatctgggatgctgaggaactgctggagggatac
aagagggagggcattgacccaaccccttactactggtacactgaccagaggaagtatggt
acctgtccccacggtggctacgggctcggcctagagaggtttctaacctggctgctgaac
agacaccacatcagagacgtgtgtctctaccctcgcttcatccagcgctgtcgaccctaa
DBGET
integrated database retrieval system
