Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409835
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Entry
139409835 CDS
T10872
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 19-like
KO
K08633
a disintegrin and metalloproteinase with thrombospondin motifs 19 [EC:3.4.24.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139409835
Peptidases and inhibitors [BR:
ocla01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
139409835
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Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_C
ADAMTS_spacer1
ADAMTS_CR_2
Reprolysin
TSP_1
Reprolysin_5
Reprolysin_3
Pep_M12B_propep
Reprolysin_2
Reprolysin_4
TSP1_spondin
PLAC
Peptidase_M10
DUF3810
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
139409835
NCBI-ProteinID:
XP_071011321
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All DBs
Position
5:8370813..8502829
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AA seq
1159 aa
AA seq
DB search
MHLKRIFSLLHQLCFLGAFAIADPHPFQESESEIIFPEVFPDTGPPAPDKPTSRETDASA
GAPDKPTSRETDANAGSSSREVRSISNWEEYESPELYHWEPQGPQTAASTGLRLRIPAFG
RDLHLILKRDTRFLSQKFMVERRQKAQKASRSSMPVSSAANTEERGCYYSGTVLNDAGSI
ASFSTCAGLMGFIQLNGDFLYIEPVNRTLAVTGQAHRVYRRKRSTTEERQTDKQTTDKQT
SSNYCGVIPERQKSKNRKPSEGGRGKRYLYKLLHEYNVETVVVADPAMVSYHGSEAAKRF
ILTIMNMVFNLFQHKSLGIQINIRLTKLVLLHETPSDMYIGHHGEKMLESFCRWQQEEYG
KKSVMSDFSTRWREDLPSVDTAILITRKDFCVHKDEPCDTVGIAYLSGMCSERRKCILAE
DNGLNLAFTIAHEMGHNMGVSHDNDHQSCADGLHIMSGEWVKGQNLGDVSWSGCSRDDVE
KFLRSKASSCLLQTDPLSLNSVILPFKHPGMTYTADEQCQILFGTTASHCQNMQYVMCSG
LWCRVDGEKDCKTKLDPPMDGTECDPGKWCRAGECVSRAVPVEQAMGEWSTWGSWGTCSP
TCSTGISGRQRKCESPSGKSRDCVGSMMQYRLCENLPCPAGSPSFRDQQCQTFNRPSLHW
HSVMDDERPCTLFCSSTGKEQPRLLAEKVLDGTSCGSQESGLCANGTCQKVGCDRILSSM
AREDHCGVCNGNGKSCKVIKGDFNHTKGAGYVEAVIIPKGARRIRVMEEKPAQSYLALKD
TNKHSINSDWKIDRPGTFNMAGTTVHYVRRGLWEKMSARGPTTSPLHLMVLLFNEQNHGI
HYEYTIPTEANMEPQGGLGPGAMPSEPLFMWTHSGWEDCHAVCGGGERKTIVTCTNIVNK
TTSVVDNRRCRHLTKPEPQVRKCNEQPCQTRWMMTEWTSCSRTCGRGSQSRQVACTLQLA
NGTLVKAKDRDCAGPKPAPNQRCEGQDCVTVWEAGVWSECSVKCGRGARHRLVKCTNPRK
KCDLSTLPRETEDCEDYSKCYIWRTGDWAKCSVTCGKSMQSRVIQCMHKITGRHGNECFS
SEKPAAYRPCQQQACNERINVNTITSPRLAALTFKCLRDQWPVYCKVIREKNLCQDMRWY
QRCCETCRDFYAQKMQQRS
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgcatctaaagcgcatcttcagtctcctccatcagttatgttttcttggagcatttgcc
attgcagatccacaccccttccaggaatccgagtccgaaattattttcccggaggttttt
cctgatacaggtccaccggctcctgataaaccaactagccgagagactgacgccagcgcc
ggagctcccgataaaccaacaagccgagagactgacgccaacgccgggagcagctctcgg
gaggttcgttccatttcaaactgggaagagtacgaatctccagagctataccattgggaa
cctcaaggaccgcaaacggctgcttccacagggctgagactcagaattcctgcttttggc
agggacctgcacctcatcctgaagagagacactcgatttctgtcccagaaattcatggtg
gagaggagacagaaagcacaaaaggcatctcggagcagtatgccagtttcgtccgctgcc
aacacagaagagagaggatgctattacagcggaactgttctcaatgacgcaggatccatt
gcctcattcagcacctgcgcaggactgatgggcttcattcaactcaatggagacttcctc
tacatcgagcctgtcaatagaacgctggccgtcacgggacaggcccaccgcgtgtacagg
aggaagcgctccaccaccgaggagagacagacagacaagcagacgacagacaaacagaca
agcagcaactattgtggagtcattccagaaagacagaagagtaagaacaggaagccgtct
gagggaggcagagggaagcggtacttgtataaactactccacgagtacaacgtggagact
gtggtggtggccgacccagctatggtcagctaccacggctcagaggcagccaaacgattc
atcctcaccatcatgaatatggttttcaacttgtttcaacacaagagcctgggaatacag
attaatatcagattgactaaacttgtgctgcttcacgaaacaccatcagacatgtacatt
ggtcaccatggtgagaagatgctggagagtttctgtcgttggcagcaggaggagtatggg
aagaagagcgtgatgtcagactttagcactcggtggagggaggacctaccctccgtggac
acggccattctaatcacacggaaggatttctgcgtgcataaagatgaaccctgtgacact
gtaggcattgcctacctgagtggcatgtgcagcgagagaaggaaatgcatcctagctgag
gacaacggcctcaacctggcctttaccatcgctcacgaaatgggccacaacatgggtgtg
agtcacgacaacgaccaccagtcgtgtgctgatggcctccacatcatgtcgggagaatgg
gtcaaaggtcagaacctgggcgatgtttcctggtctggctgtagccgtgacgacgtggag
aagttcctccggtccaaggccagtagttgtctcctccagaccgacccgctgagcttgaac
tcagtgatcctgccattcaaacacccagggatgacttacacggcagatgaacagtgtcag
atcctcttcggaaccaccgcctcccactgtcagaacatgcagtatgtgatgtgttcaggg
ctgtggtgccgggtggatggagagaaggactgtaaaaccaaactggacccacccatggat
ggcacagagtgtgatccgggaaagtggtgtcgtgctggggagtgtgtgagcagagcggtg
ccagtggagcaagccatgggggagtggagcacctgggggtcctggggaacctgcagtcca
acctgcagcactggcatcagtggacgccagcgcaagtgtgagagtcccagcgggaaaagc
cgggactgtgtcggctccatgatgcagtacaggctgtgtgagaacctaccctgccctgct
gggagccccagcttcagagaccaacagtgccagaccttcaatcgcccctccctgcactgg
cactccgtcatggatgatgagaggccctgtacactgttctgttcctccacagggaaagaa
caaccccgcctcctggctgagaaggtgctggatggaacctcctgcggctctcaggagtct
ggcctctgtgccaacgggacatgtcagaaagtgggctgtgacaggatcctgagttcgatg
gcaagagaggaccactgtggggtgtgtaatggcaacggcaagtcttgtaaggtcatcaag
ggggacttcaaccacaccaaaggagcaggctatgtggaagctgtgatcatccccaaaggg
gccaggagaatcagagtgatggaagaaaagcctgcacagagttatttggcactcaaagac
acaaacaagcattccatcaacagcgactggaagatagaccgcccaggaaccttcaacatg
gcgggcaccaccgttcactacgtccggagaggactgtgggagaaaatgtcagccagaggt
cccactacctccccgctgcatctcatggtgctgctgttcaatgagcagaaccatggcatc
cattacgagtacaccatccccacagaggctaacatggaaccccagggggggttaggaccg
ggggccatgcccagcgaacccctcttcatgtggacccactctggctgggaggactgccat
gccgtgtgtggaggaggagaaagaaagacaatcgtcacctgcactaacattgtcaacaaa
actacaagtgtggtggacaaccgaagatgtcgtcacctgaccaaacctgagcctcaagtc
cgcaagtgcaatgagcagccctgccagacaaggtggatgatgactgagtggacgtcttgc
tctcgtacctgtggtagaggctctcagagcagacaggtagcctgcaccttgcagctagcc
aacggcaccctggtcaaagccaaggaccgcgactgtgccggccccaagccggcccccaac
caacgctgcgagggccaggactgtgtcaccgtgtgggaggctggcgtgtggtctgagtgc
tcggtgaagtgtgggcggggggcgcgccatcggctggtgaagtgcaccaacccacggaag
aagtgtgacctgtcgaccctgccccgtgagacggaggactgtgaggactactccaagtgt
tacatctggaggacaggagactgggccaagtgctcggtcacctgtggcaaaagcatgcag
tcccgggttatccagtgcatgcacaagatcaccgggcgccatggcaacgagtgcttctcg
tcggagaagccagcggcgtaccggccatgtcagcagcaggcgtgcaacgagaggatcaac
gtcaacaccatcacctcgccacgcctggctgccctgacgttcaagtgtttacgggaccag
tggccggtttactgcaaagtcatccgcgagaagaacctctgccaagacatgcgctggtat
caacgctgctgtgaaacctgccgggacttttacgcacagaagatgcagcagaggagttga
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