Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409852
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Entry
139409852 CDS
T10872
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit A-like isoform X1
KO
K03254
translation initiation factor 3 subunit A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ocla03012
]
139409852
Translation factors [BR:
ocla03012
]
Eukaryotic type
Initiation factors
eIF-3
139409852
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Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3a_PCI_TPR-like
PCI
Motif
Other DBs
NCBI-GeneID:
139409852
NCBI-ProteinID:
XP_071011345
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Position
1:complement(60720773..60745326)
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AA seq
1261 aa
AA seq
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MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVIKSKKHRTWQKIHEPIMVKYLELCVD
LRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKLAEEKTETAKGESQQMVLDIEDLDN
IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSKVERLYHDIAQQ
AFKFCLQYTRKAEFRKLCDNLRMHLGQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSA
IAMELWQEAFKAVEDIHGLFALSKKPPKPQLMANYYNKVSTVFWKSGNALFHACTLHRLY
HLSREMRKNLTQEEMQRMSTRVLLATLSIPITPERTDIARLLDMDGIIVEKHRRLATLLG
LQSPPTRQSLINDMVRFNLLQYIVPEVKELYNWLEMDFHPLKLSGRVAKVLNWVRDQSEK
EADLQQYVPHLQSNTILRLLQQVAQIYQSIEFSRLASLVPFVDAFQLERSIVDAARHCDL
QVRIDHTTRNLSFGSDLNYSTKEDSPVGPFLQNMPSAQIRNQLTAMSSSLAKAIQVIKPA
SMLQEREEQSHLAITAYLKNGRKEHQRILARRQTIEERKERLENLNIQREKEELEQREAE
LQKVRKAEEERLRQEAKEREKERIMQEHEQIKKKTVRERLEQIKKTELGAKAFKYFDIEN
LEDLDPDFIMSKQVEQLEKEKRELQDRLKNQEKKIDYFERAKRLEEIPLIKKAYEEQRVK
DMELWELQEEERISNMKVEREKALEHKQRMSRMMQDKENFVGKITDARSFIYEEKLKQFQ
ERLVEERTKRREERKIHRKEDRRNTFYRNKEEEAQRIHEEQLKKEREERERIEQEAREAE
EAVYQERLAKLEEQERKQRARQQEIEERERRREEEMRAPARSEEKPRGEAKDWGAEKEEG
GGGWRRRTEVESERRRPVPDNVTVQAKDWRAEGREDVGEDRDREPPFRRGGDGPRRGGDD
DRGPPRRGFGDDDRPLRRGMDEDRPPRRTFGDDDRGPRRGGDEDRGPRRGFDDGPRRGFD
DGPRRGMDESRGPRRGADDDTWGPRRGGDDERGGPRDDKPWKPAVRPVALVSASGGGWRE
REKAREESWGPPREGGGRKEDEEGEREEREEKQESERFPERRPPRSDTQEEGSGGGGAWR
RPGADEAPKKSWRDSVRQEEPAREDRPPIRRERPDRRDDRDRPPPSREPEEGGSSWRRAG
DDKREERKEERPTPPRPREGEREEDGEKSSWRSEKDKENAGRPKKTTDETDDDGWTTVAR
R
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgccggcatatttccaacgaccggagaatgctctcaaacgagcaaatgagttcttggag
gttggcaaaaagcagccagctttggatgtcttgtacgatgtcatcaagagcaaaaagcat
cgaacatggcagaagatccacgagcccatcatggtcaagtacctggagctctgtgttgac
ctgcgcaagagccacctggcaaaggagggtctctaccagtacaagaacatctgccagcag
gtgaacatcaaatccctcgaggatgtggtccgagcctacctgaagttggccgaggagaag
accgagaccgccaagggggagtcacagcagatggtcctggacattgaggaccttgacaac
atccagactcctgagagtgtacttctgagtgctgtgagtggtgaagacacccaggatcgt
acagaccgtctgctgctcactccttgggtgaaatttctgtgggaatcctaccgccaatgc
ctggacctgctgcgtaacaactccaaggtggagcgcctataccatgacattgcccaacaa
gctttcaagttctgccttcagtacacccgtaaggcagagttccggaagctgtgcgacaat
ctacgcatgcatctgggtcagatccagcgccaccacaaccagagtacggccatcaacctg
aacaaccctgagagccagtctatgcacctggagacacgcctggtgcagctggacagtgcc
atcgccatggagctctggcaggaagctttcaaggctgtggaagacatccatggtctcttt
gccctttccaagaagccccccaagcctcaacttatggccaactactacaacaaggtgtcc
actgtgttttggaagtctgggaacgccctgttccacgcctgcaccctccaccgcctctac
cacctctccagggagatgcgcaagaacctcacccaggaggagatgcagaggatgtccaca
agggtcctccttgccaccctgtccattccaatcaccccggagcgcacggacatcgcccgc
ctgttggacatggatggcatcatcgtggagaaacacagaaggctggccacactactgggc
ctgcagtccccaccgacccgccagagcctcatcaatgacatggtgaggttcaatttgctg
cagtacattgtacctgaggtgaaggagctgtacaattggctggagatggacttccaccca
ctaaagctgagcggaagagtagcaaaggtgttgaactgggtgagagaccagtcggagaaa
gaggcggacctccagcagtacgttccccacctgcagagtaacaccatcctccggctgctg
cagcaggtggcgcaaatttatcagagcattgagttcagccgtctggcctccctggttcca
tttgtggatgccttccagttggagcgctccattgtggatgctgcccgacactgcgatctg
caggttcgaattgaccacaccactcgaaacctgagctttggttcagacctgaactactca
accaaagaggactctcctgtggggccgttcctgcagaacatgccctcggcgcagatccgg
aaccagctgacagccatgtcgtcctccttggccaaggcgatccaggtcataaagcctgca
tccatgctgcaagagcgtgaggagcaaagccatctggccatcactgcctacctgaagaat
ggccgcaaggagcaccagcgcatcctagcccgccggcagaccatcgaggagcgcaaggag
cgcctagagaacctcaacatccagcgggagaaggaggagttggaacaacgcgaggcggag
ctgcagaaggtgcgcaaagcggaagaggagcgcctgcgccaggaggccaaggaacgcgag
aaggagcgcatcatgcaggagcacgagcagatcaagaagaagacggtgcgcgagcggctg
gagcagatcaagaagacagagctgggagccaaggcattcaaatacttcgatatagagaac
cttgaggacctggaccctgacttcatcatgtccaagcaggtagagcagctggagaaggag
aagcgagaacttcaagaccgcctgaagaaccaggagaaaaagattgactactttgagcgt
gccaaacgtctggaggagatcccgttgatcaagaaggcctatgaggagcagcgtgtcaaa
gacatggagttatgggagctccaagaggaggagaggatcagcaacatgaaggtggagcgt
gagaaggccttggagcacaaacagaggatgtccagaatgatgcaggacaaggagaacttt
gtgggcaaaataaccgatgctcgcagcttcatctacgaggaaaaactgaaacagttccag
gagcgcctggtggaggagaggacgaagcgtcgagaggagaggaagatccaccgcaaggag
gaccgtcgcaacaccttctaccgcaataaggaggaggaggcccagcgcatccacgaggag
cagctcaagaaagagcgcgaggagcgtgagcgcatcgagcaggaggcgcgcgaggcagag
gaggcagtgtaccaggagcgccttgccaaactggaggagcaggagaggaagcagcgcgcc
cggcagcaggagattgaggagcgcgagcgccgcagggaggaggagatgagggcccctgct
aggtctgaggagaaacccagaggagaagccaaggactggggcgctgagaaggaggaggga
ggaggaggatggaggaggcgcaccgaggttgaatcagagaggcgtcgccccgtgcctgat
aatgtcaccgtacaggctaaggactggagagccgagggccgcgaggatgtcggcgaggac
agagaccgagagccacccttcaggagaggaggagacggccctcgccgtggcggagacgat
gaccgtggacccccacgcaggggcttcggggatgacgaccgccccctgcgcagaggcatg
gatgaggaccgtccaccaaggagaacctttggggatgatgaccgtggtcccagaagggga
ggggacgaggaccgcggtccccgcagaggcttcgatgatggccccaggcgtggttttgat
gacggcccccgcagaggcatggatgagtccaggggccccagacgcggggctgatgatgac
acctggggccccaggagaggaggagatgacgagaggggagggccccgtgacgacaagcca
tggaagcctgctgtccgacccgttgctctggtgtctgcttcaggtggtggctggcgtgag
agggaaaaggcccgcgaggagagctggggtccaccccgcgaaggtggtggccgcaaggag
gacgaagagggcgagagggaggagagagaggaaaaacaggagagcgaacgcttcccagag
cgccgcccacccaggtcagacacacaggaggagggtagtggaggtggtggtgcctggaga
aggccaggtgctgatgaggcgccaaagaaaagctggagagactctgttcgtcaggaagag
cctgcccgcgaggaccgccctcctatccgtcgagagcgacctgatcgcagagatgaccgt
gaccgccccccacccagcagagagcctgaagaaggaggcagctcctggcgccgtgcaggt
gacgacaagcgtgaggagcgtaaagaggaacgtccgactcctcccagacccagagagggc
gagcgtgaagaggacggagagaagagctcctggcgctccgagaaagacaaagagaacgct
ggtcgccctaagaagaccaccgacgagaccgacgatgacggctggaccactgtggcccgc
cgctga
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