Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409932
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Entry
139409932 CDS
T10872
Name
(RefSeq) nodal-related 1
KO
K04666
nodal
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139409932
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139409932
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139409932
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Transforming growth factors (RSTK binding)
139409932
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
139409932
NCBI-ProteinID:
XP_071011442
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Position
5:complement(27716967..27718873)
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AA seq
404 aa
AA seq
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MEGLTQAIFSVLLVDLCSVVGAENIPGNREAFFHRSSGGHRDHVHHSSRFPLYMMQLYRI
LLEGDTFRAPPSVCAAPTKSEDISRLHESDSVLSLVAKSCHQSGGRWSVTFDASSISASD
NIKRSELRIRLPTFSASEHVTVDLYHSQSGRCSSPPCPESLFLGCLRAEPSSLTATSNWR
VFNVTTLLRYYWLHQGGSAPGHEEGREVREKGLESVLHPTADRVMMVVFSKHQTKKRAPT
LIRTAEHSKYVTLDRERAGAGPAVSVEGGKGARRRKRHGLHQRAGVAGVAPGMAHTEERK
GPLCKKVDMWVDFDQIGWSEWILYPKRYNAYRCEGSCPTPVDETVTPTNHAYMQSLLKLH
SSDRVPCPSCVPTRLAPLSMLYYENSEVLMQHFQGMVVDECGCH
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaaggactcacccaggctatattttctgtgcttctggtggatttgtgctctgtggtt
ggagcggagaatatccctgggaaccgtgaggctttcttccacagaagtagtggaggtcac
agggaccatgttcatcactccagcaggttcccactctacatgatgcagctctaccggatt
ctgctggagggagacacattcagggcgccgccatctgtctgcgccgccccgaccaagagt
gaggacatctcccgtcttcacgaatctgactctgtactcagtctggtagccaaaagttgt
catcagagcggtgggaggtggtctgtcacctttgatgcatcctccatctctgcaagtgac
aacatcaagcgctccgagctgcgaatccgtctgcctaccttctctgcctctgagcatgtc
actgtggacttgtaccactcccagagtggccgctgctccagcccgccatgcccagagagc
ctcttcctgggatgcctgagggcagagcccagctccctgactgccacatccaactggagg
gtgttcaacgtcaccaccctgctccgctactactggctgcaccagggaggctctgcacct
ggccatgaagagggaagggaagtgagagagaagggtctggagagtgtcctgcaccccaca
gccgaccgggtcatgatggtggtcttctccaagcaccagacaaagaagagggcccccacc
ctcatccgcaccgctgaacattccaagtacgtcactctggaccgggagcgagctggagct
ggccctgctgtcagcgtagagggaggaaagggagcccggcgcaggaagaggcacgggctt
caccagagagcaggagtggctggggtggcccctggcatggcccacacggaggagaggaag
ggcccgctgtgcaagaaggtagacatgtgggtggactttgaccagataggctggagcgag
tggattctttaccccaagcgctataacgcctaccgctgtgagggcagctgccctacccca
gtggacgagaccgtcacccccaccaaccatgcttacatgcagagtctactgaagcttcac
agctcagaccgggtcccgtgcccgtcctgtgtgcccacccgcctggcccctctgtccatg
ttgtattacgaaaacagcgaggtgctgatgcagcactttcagggcatggtggtggacgag
tgtggctgccactga
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