Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409945
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Entry
139409945 CDS
T10872
Name
(RefSeq) paired box protein Pax-8-like
KO
K09293
paired box protein 8
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139409945
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139409945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
HTH_Tnp_IS1
DUF6115
HTH_SB
Motif
Other DBs
NCBI-GeneID:
139409945
NCBI-ProteinID:
XP_071011453
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Position
5:complement(28616310..28624662)
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AA seq
474 aa
AA seq
DB search
MWKTYTELSRPEAVKFLARSDLIGHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPC
DISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAW
EIRDRLLAEGVCDSDTVPSVSSINRIIRTKVQQPFNLPLDGKGLSPGHILIPSSAVTPPE
SPQSDSLGSTYSISGLLGIPQPSQEGKRSHDDSDQESCRHSVDSQGSGGVPRKQLRPEHF
PPQHLDCGFDRHHYPPDSFSSAAASKTEQTVYPLSLINGSLEDGKTSLSTSSAAIGRNLA
AHQGYTVVADPLQPLPLCLKQEMSPEVTSTSPSPNVVANSAFLELQSLQAPVSISSSCSS
SNHFPHAFNSFSHHAPVYSQFSSQSLIAGRDMVSSTLPGYPPHIPSSGQTGYSSSAITGM
VAGADYSGQTYTHSPYTSYSEAWRFTNSSILGSPYYYSSASRTAPPSTAAYDHL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagacatacacagagctgtctagaccagaagctgtcaaatttctagctagatcc
gacttaattggtcatgggggtcttaatcaactaggcggaatgtttgtgaacggccgtccg
cttccggaggtgatccggcagcgcatcgtggacatggcccaccagggcgtgcgtccctgt
gacatctcccggcagctccgcgtcagccacggctgtgtcagcaagatcctgggacgctac
tacgagactggcagcatcaagccaggagtgattgggggctccaagcccaaggtggccact
cctaaagtggttgataaaatagcagattacaaacgtcagaaccccaccatgtttgcctgg
gagatcagagacaggctgctggcagagggagtgtgtgacagcgacaccgtgcccagtgtc
agctctatcaacagaataatccgaaccaaggtgcagcagccattcaatctgcctctggat
ggcaaaggcctaagcccaggacacatactcatccccagttcagccgtcactccccctgag
tcaccccagtccgactccctgggctccacctactccatcagtggcctgttggggatacca
caacccagccaggagggcaagaggagccatgacgacagtgaccaggaaagctgtagacac
agtgtggactctcagggcagcgggggcgttcctagaaagcaactgagaccagagcacttc
ccaccgcagcacctggactgtggcttcgaccgccaccactaccccccagactccttcagc
tctgctgcagctagcaagaccgagcagactgtgtaccctctctcgctcatcaatggcagt
ctagaagatgggaagaccagcctctcaacatcgagtgctgctattggtcggaatctggca
gcgcaccagggctacactgtggtggcagaccccctacagcccctcccactttgtctgaaa
caggaaatgtccccagaggtgaccagcacaagcccctctccgaatgtggtggccaactca
gcttttctggagctgcaatcgctgcaggcccctgtgtctatcagtagcagctgcagcagc
tccaaccatttcccccatgccttcaactcattctcccatcatgcaccagtgtacagccag
ttcagcagccagtctctcatagcaggaagggacatggttagctccactctccccggctac
cctcctcacatcccctccagtggccagacaggctactcatcctccgccatcactggcatg
gtagcaggtgcagactactctggccagacctacactcactccccctacacctcctacagt
gaagcttggagattcaccaactccagcattttgggttcaccctattactatagctcggcc
tcccgcactgctccaccatccactgcagcctacgaccatctctag
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