Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409947
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Entry
139409947 CDS
T10872
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
139409947
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
139409947
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139409947
NCBI-ProteinID:
XP_071011456
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Position
5:complement(29443494..29447353)
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AA seq
295 aa
AA seq
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MAANMRLPTIRKQVSLSSSLSALDGKDLVVPGDVITSDTGFMRGHGTYMDEEKLTASVAG
EVERVNKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVDTNSRLDSVLLLSSVNLPGG
ELRRRSAEDELTMRDYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSL
IKRQKTHFHNLPCGASIILGNNGFVWLYPTPGHQDEEAGGYYTSLEPVSLSDREVISRLR
NCLLALGAHKVLLYDTSVLYCYESSLPHQIKDILKPEVMEEIVMMTRQKLVELEG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaatatgagattgccaactattcggaaacaagtatcgttatcatcctctctg
tctgctttggatggaaaagatctagttgttcccggtgatgtgatcacatcagatacaggg
tttatgaggggtcatgggacttacatggatgaagaaaaactaacagcctctgtggcagga
gaggtggagagagtgaacaagctcatctgtgtacggccgctcaagaccaggttcaacggg
gaggttggagatgtggtggttgggaggatcacagaggtgcagcagaagcgctggaaggtg
gacaccaactccagactggactctgtgttgctgctgtcctctgtaaatctgcccggagga
gagctgaggagacggtcagcagaagatgagctcaccatgagagactaccttcaggagggg
gacctcatcagtgcagaggtacagtctgttttctcagatggggcgctctctcttcacacc
cgcagtttaaagtatggaaagttggggcaaggagttcttgtgcagctatctccctctttg
atcaagagacagaaaacccacttccacaacctgccttgtggggcctctatcatcctgggc
aataatggctttgtgtggctgtaccccaccccaggacatcaggacgaggaggctggagga
tactacaccagtcttgagcctgtctctctctcagatcgggaggtgatctcacggttgagg
aactgcttgttggccttgggggcacacaaggtgcttctgtacgacaccagtgtgctctac
tgttacgagtcatcactcccacaccagatcaaggatatcttaaaaccagaggtgatggag
gagattgtgatgatgacacgtcagaaacttgtcgaactggagggttag
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