Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409995
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Entry
139409995 CDS
T10872
Name
(RefSeq) splicing regulator ARVCF-like
KO
K28154
splicing regulator ARVCF
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139409995
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139409995
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT_EZ
V-ATPase_H_N
Arm_2
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
139409995
NCBI-ProteinID:
XP_071011514
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Position
5:complement(38430936..38447707)
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AA seq
892 aa
AA seq
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MPAEVKEEQIPEGPSSLSAITLETKESHVEPADDDLNTPTSNSSVVTSTNGSSTAETEAP
QHTEDPKAVELANDQADTPTPQLPPAPQHPPVTQVPMCPDNQSLQPSPLTNVQHSSEYLT
PLITTTATITTLPPPYNNTDRDPNTEIPERQNSIYTLPDPPFPGLGGDMCSGYGSLSRGG
VHHSSLHTYWPSRNYQTQPGGHYTLPLPRDNYGQGGLTNQTEGEGPGDAQDVKADYPTSS
YATLGGIHYLRPITTMELLMEPSRTRGGYEEALMSQVDGDPSSFFQAMSRAQILQFPHKR
CSMVSLDSIRKDPRWRDPNLREVITMLSHPMDPVKSNAAAYLQHLCYENDHMKQDVRQLK
GVPVLVGLLDHPKAEVHRKACGALRNISYGKDHHNKVAIKNCDGIPALVRLLRKSSNMEV
RELVTGTLWNLSSHEPLKMMIINHGLQTLTDEVIIPHSGWRRDPTEHSRPQETEWTTVFK
NTSGCLRNVSSDGAEARQRLRECEGLVDALLHALQSAVAHKETDNKSVENCVCILRNLSY
HVHKEVPGAERFQEPVANQVPGLGGNQKKKKEADCFGGKKPKEEWFSQSWRNGPSDKKYG
TLDLPKRTEPMKGLELLYQPEVVRLYLSLLTCSQNHNTLEAAAGALQNLAAGHWAWSSYI
RATVRKEKGLPVLVELLRSDGDKVVRAVAIALRNLAIDRCNKDLIGSYAMRDLVSNLPCG
QQRPAKNLEGDTVVAILNTIHEIISDSPENARGLIQGHAIQKLVAINKTSQSGRETKAAS
HVLQTVWAYKDLRNSLYKGGWNKSHFKPTTSGMPKKPKSGKSGYDDITLPLMEKNQDGYS
TVEQGDRVGDGPGHMMEREPLQSIPERKHFIRAGRPAVGLVERKPPPLDSWV
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagaggtgaaagaggagcagatcccagaggggccctcgtctctgtcggctata
accctggagaccaaggaatcacatgtggagcctgcagacgatgacctgaacacacccacc
tccaactcctctgttgtcacctccaccaatggcagctccactgcagagacagaggcacca
caacacacagaggaccccaaggctgtggagctggcgaatgaccaggcagacacacccacc
ccacagcttcccccagccccacagcatcccccggttacccaggttcccatgtgtccagac
aaccaatctctgcagcccagccccctgaccaacgtccaacactcctctgagtacctcacc
ccccttatcacaaccactgctaccatcaccactctcccccctccctacaacaacacagac
cgtgatcccaacacagagatccctgagaggcagaacagcatctacaccctccccgaccct
ccctttcctggccttggaggtgatatgtgttctgggtatggcagcctgtctcgaggaggt
gtccaccatagctccctccacacctactggccctccaggaactaccagacccagcccgga
ggccactacaccctgcccctacccagggacaactacggccaggggggcctgactaaccag
accgagggggaaggaccaggggacgcccaggatgtaaaggctgactaccccacctccagc
tacgccaccctggggggaatccactatctcagacccatcactaccatggagctcctgatg
gagccgtccagaaccagagggggatacgaggaggccctcatgtcccaggtggacggagac
cccagctccttcttccaggccatgtccagggcccagatcctacagttcccccacaagcgc
tgcagcatggtcagcctggacagcatccgtaaggacccccgctggagggaccccaacctg
agggaggtcatcaccatgctcagccaccctatggacccggtcaagtccaacgccgccgcc
tacttgcagcacctgtgctacgagaacgaccacatgaagcaggacgtcaggcagctgaag
ggggttccagtactggtgggcctcctggaccaccctaaagccgaggtccaccgcaaggcc
tgtggagccctgaggaacatctcctacgggaaagaccaccacaacaaggtggccatcaag
aactgtgacggcatccccgccctggtcagactgctgagaaagtcaagtaacatggaggtc
agagagctggtcacagggaccctgtggaacctctcctcccatgagcctctgaagatgatg
atcatcaaccacgggctccagacactgactgatgaggtcatcatcccccactctggctgg
aggagagaccctactgagcactccagaccccaggagacagagtggaccaccgtgttcaag
aacacctcaggatgtctcaggaatgtgagctcagatggggcagaggctcggcagagactg
agggagtgtgaggggctggtggacgcactcctccatgcccttcagtcagctgtcgcacac
aaggagaccgacaataagtcggtagagaactgtgtctgcatcctgagaaacctctcctac
cacgtccacaaagaggtgccgggggcggagagatttcaggaacccgtggccaatcaggtg
ccagggttaggagggaaccagaagaaaaagaaggaggcagactgttttggagggaagaag
ccaaaggaggagtggttcagtcaaagctggagaaatggaccaagtgataaaaaatatggt
actctggatttacccaaacgcacagaaccaatgaaaggtctggagctgctttaccagcca
gaggttgtgaggctgtacctgtctctcctcacttgcagtcagaaccacaacaccctggag
gcagcagccggagcgctgcagaacctcgctgcaggacactgggcttggtccagttacatc
cgggctacagtgaggaaggagaaaggtctgcctgtcctggtggagctactgcgttcagat
ggtgataaagtggtccgggctgtagctattgctctccgcaacctggccatagatcgctgc
aacaaagacctcatagggagttatgccatgagggacctggtcagtaacctgccctgtggt
caacagaggccagccaagaacctggaaggggacacagtggtggccattctgaacactatc
catgagatcatctcagacagccctgagaacgcccgaggtctcatacagggccacgccatc
cagaaactggtagccatcaacaagacaagccaatctgggcgagagaccaaagcagcatct
catgtcctgcagacagtgtgggcttacaaggacctaagaaacagtctctacaagggaggc
tggaacaagagccactttaagccaacaactagtggaatgcccaaaaaacccaagagcgga
aagtcaggctatgatgacatcacactgcctctgatggagaaaaatcaagatggatactcc
actgtggagcagggggacagagtgggtgatgggccaggccacatgatggagagagagcct
ctccagagtatcccagagaggaagcacttcatccgggctggaaggcctgcagtgggcctg
gtggagcgcaaacctccacccctcgactcctgggtctga
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