Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410004
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Entry
139410004 CDS
T10872
Name
(RefSeq) homeobox protein Nkx-6.1
KO
K08030
homeobox protein Nkx-6.1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139410004
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
139410004
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
PKK
ABC_trans_N
Motif
Other DBs
NCBI-GeneID:
139410004
NCBI-ProteinID:
XP_071011524
LinkDB
All DBs
Position
5:38888039..38890224
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AA seq
323 aa
AA seq
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MLAVGQMDGSRQSAFLLSTPPLAALHSMAEMKTPLYPAYPLSSTGPASSTSPTATSPNPG
GIPVSSPGIKPSSGMSSLGSPHQCSALGTPHGINDILSRPSILSPGAAAAVAASSSAGIL
SGMPRFSSLSPPPPHGLYFSPSAAAVAVARYPKPLTDLPGRTPIFWPGVMQSPHWRDARF
ACSPHQNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQ
VKVWFQNRRTKWRKRHAAEMASAKKKQDSETERLKGASENEDDDDDYNKPLDPNSDDEKI
TQLLKKHKPNSSLLIHTSENDSS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgttagccgtgggacagatggacgggtccagacagagcgctttcctcttaagcacccca
cctttagcagctctgcatagcatggcggagatgaagaccccactctacccagcctacccg
ttatcttccaccgggccggcctcttctacctcacctactgccacctctccaaaccccggt
ggcatcccggtgtcctcaccggggatcaaaccatcctccggaatgtcatctctcggatcc
ccccatcaatgcagcgcgctaggaacacctcatggaataaacgacatcctcagtcgtccc
tcgatcctttccccaggagctgctgctgccgttgctgcgtcctcttctgccggaatcttg
tccggaatgccccgcttcagtagcttgagccccccgccaccccatgggctctacttcagc
cccagcgctgcagcagtggcagtggctcgctaccccaagccgttgacagaccttccaggc
aggaccccgatattctggccaggagtcatgcaaagcccacactggagagacgccagattc
gcatgttcaccccatcagaattctgtactgctcgacaaagatggaaaaagaaaacataca
cgtcccaccttctctggacaacaaatctttgccctggaaaagacttttgagcaaacgaaa
tacctcgctgggccagagcgagcacgactggcctactcgttgggaatgacagagagccaa
gtgaaggtgtggtttcaaaaccgaagaactaaatggagaaaacggcacgcggctgagatg
gcttcggcaaagaagaagcaggattctgagaccgagaggctgaaaggggcttcggagaac
gaagatgatgatgatgattataacaagccgttggaccctaactcagacgacgagaaaata
acacaactactgaaaaaacacaaaccaaactcctcactccttattcatacgtcagaaaac
gacagttcgtag
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