Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410039
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Entry
139410039 CDS
T10872
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 6-like
KO
K08621
a disintegrin and metalloproteinase with thrombospondin motifs 6 [EC:3.4.24.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139410039
Peptidases and inhibitors [BR:
ocla01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
139410039
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
TSP_1
ADAMTS_CR_2
Reprolysin_5
ADAMTS_CR_3
Reprolysin_3
TSP1_spondin
Reprolysin_2
PLAC
Reprolysin_4
TSP1_CCN
DAGK_cat
Peptidase_M57
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
139410039
NCBI-ProteinID:
XP_071011571
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All DBs
Position
5:41319708..41635177
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AA seq
1143 aa
AA seq
DB search
MMEILRKTLTCILILSLVVVMASSEFQRLSHNSQVEYLSYLQHYQLTVPMQVDENGDFLS
YTVKHHRPGRRRRTADPTSTAVGPEPTGRAEQDPAQTRVFYRLSAYGKHFHLNLTLNPQL
VSKHFTVEYWGREGLEWRHDMVENCHYVGYLQDQYSSTRVALSNCKGLHGVITTEEEQYL
IEPLKNISSTTSSQWDQGEGQQHVIYKKSSIPSPWQQSGQHEFSCGISDLTKNASPCQHS
TPSPTSPSSSPTPAPGSNSTLPGGGHRRRRSLSTERFVETLVVADKMMVGYHGRKDIEHY
ILSVMNIVAKLYRDASLGNVVNIIVTRLIVLTEDQPNLEINHHADKSLDSFCKWQKSILS
HQGDGNSIPENGMAHHDNAVLLTRYDICTYKNKPCGTLGLASVAGMCEPERSCSINEDIG
LGSAFTIAHEIGHNFGMNHDGIGNSCGTKGHEAAKLMAAHITANTNPFSWSACSKDYITS
FLDSGRGTCLDNEPLKRDFLYPTVVPGQVYDADEQCRFQYGASSRQCKYGEVCRELWCLS
KSNRCVTNSIPAAEGTLCQTGSIEKGWCYQGECVIFGTWPQSVDGGWGPWSSWGECSRTC
GGGVSSSMRHCDSPAPSGGGKYCLGERKRYRSCNTDACPSGSRDFRVKQCADFDSMPFRG
KYYNWKPYTGGGVKPCALNCLAEGYNFYTERSPAVIDGTRCQADSLDICINGECKHVGCD
NILGSDAKEDRCRVCGGDGSTCEATEGLFNDSLPRGGYMEVVLIPRGSVHIEIQEVSMSK
NYIALKSEGDDYFINGAWTIDWPRKFDIAGTAFHYKRPLDEPESLEALGATTDNLVVMVL
LQEQNMGIRYKFNVPIQRTGSGDNEVGFSWHHLAWSDCSATCAGGSQKQEVLCKRLDDNS
VVQNSYCDPDNKPPENQRSCNTEPCPPEWFIGDWSDCGKTCGGGMRTRTVLCIRKMGPAE
DETLEDSHCLTHRPIEREACNNQSCPPRWVTLDWSECTPKCGPGFKHRIVLCKSNDLTKT
FPPAHCPSHRKPPVRTRCSLGRCPPPRWIPGEWGQCSAQCGLGQQMRTVQCLSYTGQPSS
DCPEGLRPTAMQQCESKCDAMPIANGDECKDVNKVAYCPLVLKFKFCGRAYFRQMCCKTC
QGR
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaattttgcggaagacgctgacttgtatattgatattgagcctggtggtggtc
atggcttcctctgaatttcaaagactttcgcacaactcacaagtggagtacctgtcctac
ctgcagcactaccagctgactgtgccgatgcaggtggacgagaacggggacttcctcagc
tacactgtgaaacatcaccggcccggtcgcaggagacgaaccgccgacccaaccagcacc
gccgtcggcccagagccaaccggccgcgccgaacaggacccggcccagacccgagtcttc
tacagactgtcggcttacggaaagcactttcacttgaacttgaccctcaacccccagctg
gtgtccaaacatttcacggtggagtactgggggagagagggcctggagtggagacatgac
atggtggagaactgccactatgtaggatacctgcaggatcagtacagctccaccagagta
gcgctcagtaactgtaagggcttgcacggcgttattaccacagaagaagagcagtattta
atagagccattaaagaatatatcgtccaccacttccagccaatgggaccagggagaagga
cagcagcatgttatttataaaaagtcctccattccctcgccgtggcagcaatccggccaa
cacgagttcagctgtggcatctcagacctcacaaaaaacgcgagcccgtgccaacatagc
actccttccccaacctctccttcgtcctctcccaccccagcccctgggtccaacagcacc
ctgcccggggggggccacagacggaggcggtcactcagcacggaacgtttcgtagagacc
ctggtggtagctgataagatgatggttggttaccatggccgcaaagacatcgagcattac
atcctgtctgtgatgaatattgttgccaaactttaccgtgatgccagcctaggaaacgtt
gtgaacattatagtgacccgcctgatcgtactgactgaagaccagcccaacctggagatc
aaccaccatgcagacaagtctctagacagcttctgtaagtggcagaagtccatcctcagt
caccaaggagacgggaacagcatcccggagaacggcatggctcaccatgacaacgctgtc
ctcctcacacggtacgacatctgcacttacaagaacaaaccctgtgggactctaggcttg
gcgtcagtagctgggatgtgtgagccggagaggagttgcagcatcaatgaagacatcggc
ctgggttctgctttcaccatcgctcacgagattggccacaatttcgggatgaaccatgat
ggaataggaaactcatgtgggactaaaggccacgaggcagccaagctgatggcggcccac
atcacagctaacaccaaccccttctcctggtcggcctgcagtaaggactatatcaccagc
ttcctcgactcaggtcgggggacgtgtctggacaatgaacctctgaaacgagacttcctg
tacccaacagtggtcccggggcaggtgtacgacgcagacgagcagtgtcgcttccagtat
ggagcttcctcacgacagtgcaaatatggggaagtgtgtagagagctctggtgccttagc
aaaagcaaccgctgtgtcaccaacagtatccctgctgccgaggggaccttgtgtcagacg
ggaagcatcgagaaagggtggtgctaccagggggagtgtgtgatatttgggacgtggccc
cagagtgtggacggaggctggggtccctggtcgtcttggggggagtgcagcaggacctgt
ggagggggagtctcttcctccatgagacattgtgacagcccagcgccttctggaggaggg
aagtactgtctcggagagaggaagcgctacagatcgtgtaacacagacgcatgcccatcg
ggatcccgggacttccgggtgaagcagtgtgccgacttcgacagcatgccgttccgtggg
aaatactacaactggaagccctacactggaggtggcgtgaagccatgtgctctgaactgt
ctggcggagggatataacttctacaccgagcgctccccggccgtcatcgatggaacacgc
tgccaggccgactcactggacatctgcatcaatggagagtgcaagcacgtaggctgtgac
aacatcctgggttcggacgccaaggaggaccgctgtcgggtgtgtggaggggacggcagc
acctgtgaggccacagagggactgttcaatgactccctacccagaggcggttacatggag
gttgttctgataccaaggggatcagtccacatagaaatccaagaagtctccatgtccaag
aactacatcgcgttgaagtcagagggagatgactacttcatcaacggagcgtggaccatc
gactggcccaggaagtttgacatcgcagggacagcgttccactacaagaggccacttgac
gaacctgagtcgctagaggccctgggagccaccacggacaacctagtcgtcatggttctt
ctccaggagcagaacatggggatccgttataagtttaacgttcccatccagaggacagga
agtggggacaatgaggtgggcttctcctggcaccatctggcctggtccgactgctccgcc
acctgtgctggaggttctcagaagcaggaagtgctgtgtaagcgtctggatgataactcg
gtggtgcagaacagctactgtgacccagacaacaaacctccggagaaccagaggtcctgc
aacactgaaccgtgccctccggagtggtttatcggcgactggtcggactgtgggaagaca
tgtggcggtgggatgcggactcggacggttctgtgcatcaggaagatggggcctgccgag
gatgagaccctggaggacagccactgtctgacgcaccgaccaatagaacgagaggcctgc
aacaaccagtcctgcccccctcggtgggtcactctggattggtcagagtgcacgcccaaa
tgtggccctgggttcaagcaccgcattgtgctgtgtaagagcaacgacctgaccaagacc
ttcccgcccgcccactgtccctcccacaggaagccccccgtcaggacccgctgtagtctg
ggacgctgtccgccacctagatggatcccaggggaatggggacagtgctcagcgcagtgt
ggactgggccagcagatgcggacggtgcagtgtctctcttacacgggccagccctccagt
gactgtcccgagggcctcaggcccactgccatgcagcagtgtgagagcaagtgtgacgcc
atgcccatcgccaatggtgacgaatgcaaagacgtaaacaaagtggcatattgcccactg
gtgctgaagttcaagttctgtggccgtgcgtacttcagacagatgtgctgcaagacgtgc
caaggacgctga
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