Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410117
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Entry
139410117 CDS
T10872
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1-like
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139410117
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
139410117
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
Det1
IRK
Motif
Other DBs
NCBI-GeneID:
139410117
NCBI-ProteinID:
XP_071011661
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Position
5:58183604..58189740
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AA seq
963 aa
AA seq
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MRLVLVKPTNATRRLDSTGDACNDQDPDHCNSRGQSLPDKAPEVMQYRYSGTALQPQMSI
PEQSNNSISTSTSPPQATPNGVAPPRKSPPLKTTLSKLSNQDLLLFCSQVGGTLELQRES
PLLAEWHGTTVGHPDADCGSVCYSPSTKHGSEVAGFQPQSKQGFLKDCLSTFSKKGTPPS
LQYTHSYPQNSLVSSSSRFFRQKPSQEDPSTGTVNPEKDNFTSRCRGEDGLKEYNQWQQQ
THNHFKIKEHNLPPVSTTEKTEPSLNIPLNGNESSKVRQLLVLSQSQDQQKLPLDTQHQW
MLGNGLPSCCANECGVHCGSQQPYLNQQLQQHPQRQHCCDHLSILKCHQCSLYPSSSSPR
GKNSFPATSDKSSAHSSSSSQRWPENHQLEGEGQRQGEQQVHPHTKKVGHVGSTPSLSKS
SSPLPPDTVVTSAKYNGDVGRPLSSLGASPPNLSELDSARQEPLQTLHRSVLEEVFSKGL
SEDNSKGNSEGGGDAPQKRTKDIGYRLGQRRALFGKRKQLSDYALIFGMFGIVVMVTETE
LSWGVYTKESSYSFALKCLVSLSTAVLLGLIVMYHAREIQLFMVDNAADDWRIAMTYERI
FLVVLELLVCAIHPIPGQYIFTWTARLAFTYPHSLTNADVDLVLSIPMFLRLYLIGRVML
LHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSVSCWIIAAWTVRVCER
YHDTQEVTNNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVA
RKSELTRAEKHVHNFMMDTQLYKRVKNTAANVLRETWLIYKHTKLVKKIDHARVRKHQRK
FLQAIHQLRRVKLEQMKLTDQANTLVDLAKTQNMMYDLVSDLQLRSEELDRRIGSLDDKL
DSILVNLQALPSLLSQAVTQQHKDFLDGLAHRVRKASSESELHWVPARCQRSLSTAPQTI
PYS
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggttctggtcaaacccaccaatgcaacacgtcggctcgattcaacaggagac
gcttgcaacgaccaagacccggatcactgcaactctcgagggcagtctctaccagacaaa
gcccctgaggtcatgcagtatcgctactctggaactgccctccagccccaaatgtcaata
ccagagcagagcaataacagcatttccacttccacttctccgccacaggctactccaaat
ggagtcgctccaccacggaaatctccaccattaaaaactacactgtcaaaactgagcaat
caagatctcctgctcttttgtagccaggtgggtggtactcttgaactgcagcgtgaaagc
ccactgttggctgagtggcatgggaccacggtgggacatcctgatgcggactgtggctct
gtttgctattctcctagtacaaaacatggatcagaggtggccggtttccagccacaatca
aagcagggcttcttgaaggactgcctctccacattctccaagaagggaactcctccttct
ctacagtatacccactcctatcctcagaactccctggtgtcatcgtcatcacggtttttc
aggcagaaaccaagtcaagaggatccctcaacagggaccgtcaatcccgagaaggataat
ttcacatcccgatgcagaggagaagacgggctgaaggagtataatcaatggcagcagcag
acccataatcatttcaagattaaagagcataacctaccaccagtctcgactactgaaaaa
acagagccttcactgaatatacctctgaatggcaatgagtcaagtaaagttaggcagctc
ttggttttgtctcaatctcaggaccaacagaaacttcccttagatacacaacaccaatgg
atgctaggaaacggtttacctagctgctgtgccaatgagtgtggagtgcattgtggaagc
caacaaccttacttaaaccagcaactacagcaacaccctcaaaggcagcattgttgtgac
catcttagcattctaaaatgccatcagtgttctctctacccatccagcagcagcccacga
gggaagaattcattcccggctactagcgacaaaagcagtgctcactcctcttccagtagc
cagcggtggccggagaaccatcaactagagggagaagggcaacgacaaggggagcaacag
gtacatcctcataccaaaaaggttggccatgttggttcaacgccttccctgtccaagagc
agtagcccactccctcccgacacagtagtgacaagcgctaaatacaatggggatgttggg
agacccctgagcagcttaggggcttcgccacccaacctttcagagctggactcagcaaga
caagagcccctccagactctccacaggtccgtcctggaggaggtgttctccaaaggcctc
agtgaggacaatagtaagggcaacagcgagggaggaggagacgcgccacagaagaggact
aaggacattggctacagattgggccagcgtagagcgctatttggaaagcgcaaacagctg
agcgactatgccttgattttcgggatgtttgggattgttgtcatggtgacggagacggaa
ctgtcctggggggtttacacgaaggaatcatcatactcatttgctctgaaatgcctcgtc
agcctttcaactgctgtattgcttggcctcattgtgatgtaccatgcacgggaaatacag
ctcttcatggtggacaatgcagctgacgactggaggattgctatgacatatgagcggatc
ttcctggttgtgctggagctgctggtctgtgccatccaccccatcccgggccagtacatc
ttcacctggacagcccggctggccttcacctacccacactcattgaccaatgccgacgtg
gacctcgtcctctccatccccatgttcctcaggctctacctaatcggtcgcgtcatgctg
ctgcacagcaagcttttcacggatgcctcgtcccgcagcatcggcgccctcaacaagatc
aacttcaacacgcggttcgtcatgaagaccctcatgaccatctgccccggcacggtgctg
ctggtcttcagcgtctcttgttggatcatcgcagcgtggacggtgcgtgtatgtgagagg
tatcatgacacacaggaagtgactaataacttccttggggccatgtggctcatctctatc
acctttctctccattggttatggagacatggtccctcacacttactgtggaaagggtgtg
tgtctgctgactggaatcatgggggctggctgcactgccctggtggttgctgtagttgcc
aggaagtctgagttgaccagagctgagaagcatgttcacaactttatgatggacactcag
ctctataaacgagtgaaaaacacagctgccaatgtactcagagagacatggcttatctac
aaacacaccaagttagtcaagaagatcgatcacgccagggtacgcaaacatcagcgcaaa
tttctgcaagccattcaccaactgcgcagagtcaaactggaacagatgaaactcaccgac
caggctaacacacttgtggatctagccaagactcagaacatgatgtacgacctggtgtct
gacctgcagctgcgcagcgaggagctggataggaggattggtagtttggacgacaaactg
gactccatcctagtcaatctgcaggccctacccagcctgctctcccaagcggtcacacag
cagcacaaggacttcctggatggcttggcccaccgtgtacggaaagcctcgtcggaatcg
gagcttcactgggttcccgctaggtgccaacggtccctttccactgcaccacagaccatt
ccttacagctga
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