Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410118
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Entry
139410118 CDS
T10872
Name
(RefSeq) sphingosine 1-phosphate receptor 4-like
KO
K04293
sphingosine 1-phosphate receptor 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04068
FoxO signaling pathway
ocla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
139410118
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139410118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139410118
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Lipid
Sphingolipid
139410118
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
139410118
NCBI-ProteinID:
XP_071011662
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Position
5:58774284..58778658
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AA seq
399 aa
AA seq
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MDALSSLSSSTSCSHLYLLASNTTNSSAINIDVILEHYNHTGRLQHRVPRQGGLSSAAVL
SLFISVLIILENLLVLVAVLSRILYSRRWVYVCIANITLSDLLAGAAYVVNIWMSGSQTF
RLSPALWLFREGVLFVALAASIFSLLLIAVERYTTMMKPLHQKSARKTYRIYGLVALCWI
VAFAIGFLPLLGWNCVCSLESCSTLLPLYSKSYILFSLLIFSLILLAIGVLYGAIYSHVR
SSSKLGSQRSRKRSLGLLKTVISIVGVFIICWGPLFILLLVDFFCVSRQCAPLFSADWVI
ALAVINSALNPVIYTLGSTELRKAIAGLLCCCCLRAGLCHPDTFVSKETSSTGSIRHSSL
RNSFNKIRSLTVSPPPAPNAPKKSRRLSSTTTCLSVSSG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctgtcctccctgagctcctcaacctcctgctctcatctgtacctcttggcc
agcaacaccaccaacagcagcgctattaacattgatgtgatcctggagcactacaaccac
acagggcgcctgcagcatcgcgtgccccgtcagggtggcctgagctcagcagcggtcctc
tccctcttcatcagcgtcctcatcatcctggaaaacctgctggtcctagtggccgtgctc
tcccggatcctctacagccgccgctgggtctacgtgtgcatcgccaacatcaccctgagc
gacctgctggctggggcggcctacgtggtcaacatctggatgtcgggcagccagacgttc
agactgagcccggctctgtggctgttcagggagggggtactgttcgtggccctcgccgcc
tccatcttcagcctgctgctgatagctgtggagcgctacaccaccatgatgaagccgctg
caccagaagtcggccaggaagacgtatcgtatctacggcctggtggcgctgtgctggatc
gtggccttcgccatcggcttcctccccctgctgggctggaactgcgtgtgcagcctggag
agctgctctaccctgctgccgctctactccaagagctacatcctcttctccctgctcatc
ttctccctcatcctgctggctatcggcgtgctctatggcgccatctatagccacgtgcgc
agcagctccaagttgggctcccagcgcagccgcaagcgctccctggggctgctgaagaca
gtcatctccatcgtgggtgtgttcatcatatgctgggggcctctgttcatcctgctgctg
gtggacttcttctgtgtgtcgcggcagtgcgcaccgctcttcagcgccgactgggtcatc
gccctggccgtgataaactcggccctgaacccggtcatctacaccctgggcagcacagag
ctgaggaaggccattgccggcttgttgtgctgctgctgcctcagggcaggcctctgtcac
cctgacacctttgtgtccaaggagaccagcagcaccgggagcatcaggcacagcagcctg
aggaacagtttcaataagatcaggagtctcactgtcagtcccccgcctgcacccaatgcc
cccaagaagagtcgccgcctgagctccaccaccacctgcctgtctgtgtcaagcggttag
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