Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410146
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Entry
139410146 CDS
T10872
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139410146
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
139410146
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
139410146
NCBI-ProteinID:
XP_071011690
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All DBs
Position
5:61543586..61612298
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AA seq
1073 aa
AA seq
DB search
MDEAEDGEDESKFQQPLLCGTGSVGGGGDRNGLSLKMKQFTPGGGASSTARKNSNNELWF
MQGEESAPCAPTGATSCALLCQGDATARGGSYYRAGGDLAPGSAVTGLATCWTGEGTTGV
ICNNNGDCRRDPNISGSLSSIVSRQEKQTGGIVAADNGKRPTRCNSRVASMDGSITSVQG
QGPEVAGATTTGNEKKDSRVSFSSAPNRKASSSVQNQQNRNSLAFFKSEDGPQIVPDDGE
PQDNRTYMQRQFSSMLQPGVNKFSLRMFGSQKAVEKEQERVQSAGNWIIHPYSDFRFYWD
FTMLMFMVGNLIIIPVGITFFKDETTAPWIIFNVVSDTFFLMDLVLNFRTGIVFEDNTEI
ILDPRKIKRTYLKTWFLVDFVSSIPVDYIFLIVEKGIDSELYKTARALRILRFTKILSLL
RLLRLSRLIRYIHQWEEIFHMTYDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFP
QDCWVSLNKMVNDSWSELYSFALFKAMSHMLCIGYGRQAPESMSDIWLTMLSMIVGATCY
AMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDE
ESILEELNEPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLRFEVFQPGDYIIREG
TIGKKMYFIQHGVTSVLTKGTMGMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSV
DNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSGVFNNRENEIIQEIV
KYDREMVQQVDMQRPRAMSMSNPPTHGGIFAPPAPPQSSAIATLQQAVAMSFCPPMAGPL
VGAGALQSPWMVRRFQVMQSMSASPPPQTEQTMQPQLHAGGAFASALSSPPIQSPLAAGG
RTFQYGHSSGSQLSLVQQIVPSPPHRPNTHNSTRSLHMGSLSQDARALSASQPSLPQGGA
QPMAPSPSQSNRVSSTSIGPPQTPPGSVGLRSAVTHRMVLPHQMSVGAFPLASLPGTLTS
LGTGMGAGMGIGMGVGMGSGLAPALPDSGLPKKDSKASHPETDHVRSRLSSNL
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggctgaggatggagaagatgagtccaaattccagcagcctttattgtgcgga
accggctccgttggtggcggaggcgataggaacggtctaagtttgaagatgaagcaattt
acgccaggagggggagcatcatcaacagcgcgcaagaactccaacaatgagctgtggttc
atgcaaggcgaagagtccgcaccttgtgctcctacaggcgccacaagctgtgctctgtta
tgccagggagatgctactgcccgtggcggctcatactatagggctggaggggacttagcc
ccagggtcagcggtaaccgggttggctacttgttggacaggtgaaggcactaccggtgtg
atatgcaacaacaacggagattgcagaagggaccccaacatttcagggagcctgtcctcc
atcgtctctaggcaggagaaacagaccggtggaatagttgcagcggacaacgggaaaagg
ccaactagatgtaattccagagtcgccagcatggacggttcgatcacctcagtacagggg
caagggcccgaggtggccggggccacaactactggcaatgagaaaaaggactccagagtt
tccttctcaagtgcccctaatagaaaagcatcgtcctctgtgcagaaccaacagaacagg
aattctctcgcattttttaaatctgaggatggaccccagattgtgccagatgatggggaa
ccgcaggacaatcggacttatatgcagcgccaatttagttccatgcttcagcctggagtt
aataaattttccctgcgtatgtttgggagccaaaaagcggtggaaaaggaacaagagcgc
gtccaatcggccggtaattggattattcatccatacagcgatttcaggttctactgggat
ttcaccatgctgatgttcatggtgggcaacctcatcatcatccccgttgggatcaccttc
ttcaaggacgagaccaccgcgccctggatcatcttcaacgtggtctctgacaccttcttc
ctcatggacctggtcctcaacttccgcacaggcattgtatttgaggacaacaccgagatt
atcctggaccccaggaagatcaagaggacgtacctgaagacctggttcttggtggacttt
gtctcctccatccctgtggattatatcttcctgatcgttgagaaggggatcgactctgag
ttgtataagacggccagagccctgaggatcctacgctttaccaagatcctcagtctgctg
aggctgctcaggctgtccaggctaatccgctacatccaccaatgggaagagatcttccat
atgacctatgacctggccagtgcagtgatgcgtatcttcaacctgattggtatgatgctg
ctgctgtgccactgggatggctgtttgcagttcctggttcccatgctgcaggacttcccc
caggactgttgggtctctctcaacaagatggtgaacgactcgtggagcgagctgtactcc
tttgccctgttcaaggccatgagtcacatgctgtgtatcggttacgggcgccaagcccca
gagagcatgtctgatatctggctgaccatgctcagtatgatcgtgggcgccacctgctat
gccatgttcattggccatgccaccgccctcatccagtccctggactcatcccgacgccag
taccaggagaagtacaaacaagtggagcagtacatgtctttccacaaactgccggctgac
ttccgacagaaaatccatgactactatgaacacagataccagggcaagatgtttgatgag
gagagcatcctggaggagcttaatgaaccactgcgggaggaaattgtcaacttcaactgc
cgtaagctggtggcatccatgcccctgtttgccaatgccgaccccaactttgtgacagcc
atgttgaccaagctccgcttcgaggtcttccagcccggagattacatcatcagggagggc
accatcggcaagaagatgtacttcatccaacatggtgtgaccagcgtgctgaccaaagga
actatgggcatgaagctctctgatggatcctactttggagagatctgtctgttgacccga
ggcagacggacggccagtgtgcgggcggacacgtactgccgtctctactccctgtctgtg
gataacttcaatgaggtgctggaggagtaccccatgatgagacgagccttcgagactgtg
gccatcgaccgactggaccggatagggaagaagaactctatcctaatgcacaaggttcag
catgacctcaactcgggtgtcttcaacaaccgagagaatgaaattatccaagagattgtg
aaatatgaccgtgagatggtgcagcaggtggacatgcagaggcctcgtgccatgtccatg
tccaacccccccacgcacgggggtatcttcgctcctccagccccacctcagagctcagcc
atcgccaccctccagcaggctgtggctatgagcttctgtccccccatggcaggccccctg
gtaggggccggggccctgcagtcaccttggatggtacggaggttccaggtgatgcagagc
atgtcagcctcccctcctccccagactgagcagaccatgcagccccagctacacgccggt
ggtgccttcgcctccgccctctcgagcccccccatccagagccccctagctgctggggga
cggacattccagtacggccactcttctggctcccagctctccctggtccagcagattgta
cccagccccccacaccggcccaacacccataacagcacccgctctctgcacatgggcagt
ctgagtcaggacgccagggcactgtctgcctctcagccctctctgccccagggaggggct
caacccatggccccgagcccatcacagtccaaccgtgtttcctcaacctccattgggcca
cctcagacccccccgggttctgtggggctcaggagcgctgtgactcataggatggttctg
ccccaccagatgtctgtgggggcgtttcctctagcctccctcccggggactctgacatcg
ctggggacaggcatgggtgcgggtatgggaatcggcatgggagtgggcatgggatcaggc
ttggcgccagcccttccggactcgggtttacccaaaaaggactccaaagccagccaccct
gagacagaccatgtcagatcgaggctatcttccaatttgtga
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