KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410200
Entry
139410200         CDS       T10872                                 
Name
(RefSeq) vertebrate ancient opsin
  KO
K04256  c-opsin
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ocla01009]
    139410200
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:ocla04030]
    139410200
Protein phosphatases and associated proteins [BR:ocla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     139410200
G protein-coupled receptors [BR:ocla04030]
 Rhodopsin family
  Vision
   Opsin
    139410200
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srv 7TM_GPCR_Srsx 7TM_GPCR_Srw 7tm_4
Other DBs
NCBI-GeneID: 139410200
NCBI-ProteinID: XP_071011768
LinkDB
Position
1:complement(62780992..62802892)
AA seq 387 aa
MDTLRIAVNGVSYTEASEIYKPHADPFTGPITNLAPWNFAVLATLMFVITSLSLFENFTV
MLATYKFKQLRQPLNYIIVNLSLADFLVSLTGGTISFLTNAKGYFFLGNWACVLEGFAVT
YFGIVAMWSLAVLSFERYFVICRPLGNVRLRGKHAALGLLFVWTFSFIWTIPPVFGWCSY
TVSKIGTTCEPNWYSNNIWNHTYIITFFVTCFIMPLGVIIYCYGKLLQKLRKVSHGRLGN
AKKPERQVSRMVVVMIVAYLVGWTPYAAFSIIVTACPTIYLDPRLAAAPAFFSKTAAVYN
PVIYVFMNKQFRKCLIQLFTGKPAPENMNATSQRPGMTGESCTGGEMSAIAARIPVCGNS
QPKNEESPSECSSVAQLPIPENKVCPM
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggatactttaagaattgcagtaaatggtgtttcttataccgaggcatcagagatctac
aaaccacatgctgatccgttcactggtccaataacaaatcttgcaccttggaatttcgca
gttttggctaccttgatgtttgttataacatctctgtctctctttgaaaatttcactgtt
atgttggccacttacaagttcaaacaactgagacagcccttaaattatatcatagttaat
ttatctctcgctgacttccttgtgtcactcaccggtggaaccataagttttctaactaac
gccaaagggtattttttccttggaaattgggcttgcgttttggaaggttttgctgtcacc
tatttcgggattgtggctatgtggtccctggcggtcctgtccttcgagcgttactttgtg
atctgccggcctctggggaatgtccgtctgagggggaagcatgcagcgctgggcctgctg
ttcgtctggaccttctccttcatctggactatccctcctgtgttcggctggtgcagctac
accgtcagtaagatcggcaccacctgcgagcccaattggtattccaacaacatttggaat
cacacctacatcatcaccttctttgtgacctgcttcataatgcccttgggggtgatcatc
tactgctatgggaagctcctacagaagctgaggaaggtgtcccatggcaggctgggtaat
gccaagaaaccggagcgccaggtgagccgcatggtggtggtgatgatcgtcgcttacctg
gtgggctggacaccctacgcagccttctccatcattgtcacagcctgtcccaccatctac
ctggaccccagactggctgccgcgcccgctttcttctccaagacggccgcagtctacaac
ccagtcatctacgtcttcatgaacaaacagttcaggaagtgtctgatccagctctttacc
ggcaagcctgcgccagagaacatgaacgcaacatcgcagcgaccaggaatgacgggggag
agctgcacggggggcgagatgtcagccatcgccgcccgcatcccggtctgcggcaattct
cagcctaagaatgaggagtccccgagcgagtgcagctccgtcgcccagctaccgatccca
gagaacaaagtctgtcccatgtag

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