Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410233
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Entry
139410233 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF138
KO
K10668
E3 ubiquitin-protein ligase RNF138 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139410233
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139410233
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139410233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_10
zf-rbx1
zf-RING_6
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
139410233
NCBI-ProteinID:
XP_071011805
LinkDB
All DBs
Position
5:78739405..78743186
Genome browser
AA seq
200 aa
AA seq
DB search
MAHSAAGLQTPSEDECPICRSTPTDPHHPAACSHVFCRPCLTRSVMWLPHCPVCRAEAQV
DDIRPVRVKTGTMVVRLGQPLPGLSGLSTPATRSVAGDVQSSVVRMTFVCPFCQESCLDA
RDLWIHCNGKHYYDNRPVVCPVCVSLPHGNPHQISRNFIMHLNLRHCYYAEKYTNTHQTD
MLNLQDGIIESLQDTNLNPR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcccactctgcagcaggcctacagaccccatctgaggatgaatgtcccatctgtagg
agcaccccaacggacccacatcaccctgctgcctgttctcatgtgttctgtcgcccatgt
ctgacccgttctgtaatgtggttaccccactgccctgtgtgcagagctgaggcgcaggtt
gatgacatcaggcctgtcagagtcaagacggggaccatggtcgtcaggttgggtcaacct
ctacctggcttgtcggggctttccaccccagcaacaagatctgtggcaggtgacgtccag
agttctgtggtgaggatgacgtttgtctgtccgttctgccaggagagttgcctggatgcg
agggatctgtggattcactgcaatggcaagcattactatgacaacaggcccgtggtgtgt
ccagtgtgcgtctctctgcctcatggtaatccacaccaaattagcaggaacttcatcatg
catctgaacctgagacactgctactatgccgagaaatacacgaacacccatcaaaccgac
atgttgaacttgcaagatggcattattgagtctctccaggataccaacctgaatcccaga
tga
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