Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410280
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Entry
139410280 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: P-selectin
KO
K06496
selectin, platelet
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139410280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139410280
04090 CD molecules [BR:
ocla04090
]
139410280
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139410280
04091 Lectins [BR:
ocla04091
]
139410280
Cell adhesion molecules [BR:
ocla04515
]
Lectins
Selectins and C-type lectins
139410280
CD molecules [BR:
ocla04090
]
Proteins
139410280
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
139410280
Lectins [BR:
ocla04091
]
C-Type lectins
Selectins
139410280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sushi
Lectin_C
hEGF
EGF_3
EGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
139410280
NCBI-ProteinID:
XP_071011867
LinkDB
All DBs
Position
5:complement(91269602..91295951)
Genome browser
AA seq
1084 aa
AA seq
DB search
MLPWSNYLRQSLYNRLLVILLMTIYQDLTGETGGVQAWTYNYSVNQNLDWDSARQWCRQD
YTDMVAIQNQEEIVYLNTMLPKNSQYYWIGLRKLNEMWTWTGTNKTLTKEAENWAVGEPN
NIGDGQDCVEIYIKRGKDEAKWNDERCTKKKGALCYTASCSEHCCSAHAECLENIGNYTC
QCDPGFKGPRCQEAVECDTVSDPEQGSVNCDHPHGLFAFNSSCQFHCARGYQLQGASQLF
CQATGFWDHPAAQCQVKQCPALDSGPHRGTMNCSNPIALHSYNSTCEFNCDLGFDLIGPD
RIQCDHTGQWTGNVSTCTVVRCGPLSPPAMGNMSCVDPLGASSFTSSCGFSCEEGYLLRG
DTNLTCLSTGQWTNHTPACERELNQDNXREFSMXXEPLFIQKEYIMNEFSYGSTCTLECE
KGFVLVGTNSTHCSSLGYWSHALPVCQALQCDTLTSPPHGSLNCSGLHGQFHYGSQCLFS
CEDGFLLNGLADTECTSLGTWSRRAPLCLVVRCGPLSPPAMGNMSCVDPLGASSFTSSCG
FSCEEGYLLRGDTNLTCLSTGQWTNHTPACEALQCDTLTSPLHGSLNCSGLHGQFHYGSQ
CLFSCEDGFLLNGLADTECTSLGTWSRRAPLCLVVRCGPLSPPAMGNMSCVDPLDEFSYG
STCTLECEKGFVLVGTNSTHCSSLGHWSHALPVCQALQCDTLTSPPHGSLNCSGLHGQFH
YGSQCLFSCEEGFLLNGLAETECTSLGTWSRRAPLCLVVRCGPLSPPAMGNMSCVDPLDE
FSYGSTCTLECEKGFVLVGTNSTHCYSLGYWSHALPVCQALQCDILTSPPHGSLNCSGLH
GQFHYGSQCLFSCEEGFLLNGLADTECTSLGTWSRRAPLCLAQQCNTLTSPPHGSINCSD
LHGQFHFGSQCLFSCEEGFLLNGLAETECTSLGTWSRRAPLCLVVQCENLLPRQPSPPPT
PSSTPPPTQGPFMNCSHSLGEFSFSSLCLFSCSKGYYLNGTEELSCTSEGQWSDLVPSCQ
RNINSVQESSRMLVYAVVGAASAAGLLLLLGLGMLAAKKLRKKGDFHFDNSLWEERENPA
FENS
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgtggtccaactatctcagacagagcctatataataggttgctggtgattcta
ttgatgacaatctaccaagacttaacaggtgagacaggaggtgtccaggcctggacatat
aactacagcgtcaaccagaatctggactgggattcggcccgccagtggtgcaggcaggac
tacacggacatggtggccatccagaaccaggaggagatcgtctatctcaacaccatgctc
cctaagaactcacaatactactggatcggcctccgcaagctgaatgagatgtggacctgg
acggggactaacaagacactgaccaaagaggcggagaactgggccgtcggggagcccaac
aacataggggacggacaggactgtgtggagatctacatcaaaagaggaaaggacgaagcc
aagtggaacgatgagagatgcacaaaaaagaagggagccctctgctacacagcttcttgc
tcagagcattgctgcagcgcccatgcagagtgtttagagaacatagggaactacacctgc
cagtgtgaccctggcttcaagggcccccggtgccaggaagccgtagagtgtgacactgtg
tcggacccagagcagggttcagtgaactgtgatcatcctcatgggctgtttgccttcaac
tcctcttgccagttccactgtgcccggggataccagctgcagggggcatcacaactgttc
tgccaggccacagggttctgggaccaccctgccgctcagtgccaagtcaaacagtgtcca
gcgctggacagtggtcctcatagagggactatgaactgcagtaaccccatcgccctgcac
agttataactccacatgtgaattcaactgtgatttggggtttgacctaataggaccagac
aggattcagtgtgaccacacaggacagtggacaggcaacgtctccacctgcacagtggtg
aggtgtggccccctgtcccctcctgccatggggaacatgtcctgtgtggatcccctgggg
gcttcctccttcacctcctcctgtgggttctcctgtgaggagggctacctgctgagagga
gacaccaacctcacctgtttatctactggacaatggaccaaccacacacctgcatgtgaa
cgtgagctaaaccaagacaactagagggagttttcaatgtgataagaaccattatttatt
caaaaagaatacattatgaatgagttcagctatggctccacctgtaccctggagtgtgag
aagggttttgttctggtaggaactaactccacccattgctcctcactgggttactggagc
cacgcccttcctgtctgtcaggctctgcagtgcgacaccttaacctctcccccgcatggc
tccctgaactgctctggcctccatggtcagttccactacgggtcccagtgtctgttctcc
tgtgaggatgggttcctgctgaacgggttggctgatacagagtgcacctccctgggcaca
tggagcaggagagcccccctctgtctcgtggtgaggtgtggccccctgtcccctcctgcc
atggggaacatgtcctgtgtggaccccctgggggcttcctccttcacctcctcctgtggg
ttctcctgtgaagagggctacctgctgagaggagacaccaacctcacctgtttatctact
ggacaatggaccaaccacacacctgcatgtgaagctctgcagtgcgacaccttaacctct
cccctgcatggctccctgaactgctctggcctccatggtcagttccactacgggtcccag
tgtctgttctcctgtgaggatgggttcctgctgaacgggttggctgatacagagtgcacc
tccctgggcacatggagcaggagagcccccctctgtctcgtggtgaggtgtggccccctg
tcccctcctgccatggggaacatgtcctgtgtggaccccctggatgagttcagctatggc
tccacctgtaccctggagtgtgagaagggttttgttctggtaggaactaactccacccat
tgctcctcactgggtcactggagccacgcccttcctgtctgtcaggctctgcagtgcgac
accttaacctctcccccgcatggctccctgaactgctctggcctccatggtcagttccac
tacgggtcccagtgtcttttctcctgtgaggaggggttcctgctgaacgggttggctgag
acagagtgcacctccctgggcacatggagcaggagagcccccctctgtctcgtggtgagg
tgtggccccctgtcccctcctgccatggggaacatgtcctgtgtggaccccctggatgag
ttcagctatggctccacctgtaccctggagtgtgagaagggttttgttctggtaggaact
aactccacccattgctactcactgggttactggagccacgcccttcctgtctgtcaggct
ctgcagtgcgacatcttaacctctcccccgcatggctccctgaactgctctggcctccat
ggtcagttccactacgggtcccagtgtctgttctcctgtgaggaggggttcctgctgaac
gggttggctgatacagagtgcacctccctgggcacatggagcaggagagcccccctctgt
ctcgctcagcagtgcaacaccttaacctctcccccgcacggctccataaactgctctgac
ctccatggtcagttccactttgggtcccagtgtcttttctcctgtgaggaggggttcctg
ctgaacgggttggctgagacagagtgcacctccctgggcacatggagcaggagagccccc
ctctgtctggtggtccagtgtgagaacctattgcccagacagccatctccaccacccact
ccatcctcaaccccaccaccaacccagggacccttcatgaactgctcacactccctaggg
gagtttagcttcagctctctgtgcctcttcagctgcagcaaaggttactatctgaacgga
acagaagagctgtcctgcacctcagagggacaatggagtgaccttgtgccctcttgccaa
agaaacatcaactctgtccaagagtcctctaggatgctggtttatgcagtggtgggagct
gcctctgctgctgggctgttactactgctgggactgggcatgctggccgcaaagaagctc
cgcaagaaaggtgacttccactttgataactcgttatgggaggaaagagagaaccctgct
tttgaaaattcttaa
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