Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410295
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Entry
139410295 CDS
T10872
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139410295
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
139410295
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
CCDC18_1st
TBCA_PH
Motif
Other DBs
NCBI-GeneID:
139410295
NCBI-ProteinID:
XP_071011886
LinkDB
All DBs
Position
5:96091146..96121503
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AA seq
665 aa
AA seq
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MAKICTDQSYPATTRQQPLLGTSDDDLDSIDNGTSRANSECEDTLSEVQGAVSVLTSRHT
ESHRDSFTGSGALARLSHFLFMLRTWASHKMHHEVERPDSFLERFRGPELKEASSRESNA
QSLGYPDRVRKRKKEIWIMDPSADRYYRWLTIIAAPCFYNLMMLVTRACFNELQSTYITL
WIVLDYTSDLIYYTDTFVRSRTGFLEQGLLVKDDKKLRDKYKSTPQFKWDMISMIPTDLL
FLKVGLNYPELRLNRLAKMNRLFEFFDRTETRTSFPNVFRISNLVLYILIIIHWNACIFF
AISKTIGFGSDTWVYPNISHPEHGRLARKYIYCLYWSTLTLTTIGETPPPVRDFEYLFVV
VDFLIGVLIFATIVGNVGAMISNMNKTRAEFQAKIDSIKQYMQFRKVSKDLEVRVIKWFD
YLWTEKKTCDEKEVLKNLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLIELVLKLQPQV
FSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGAYFGEISILGIKGSKAGN
RRTANIRSIGYSDLFALSKDDLMESLTEYPDAKKALEEKGKAMLMKDNMIDEDVANAGAD
PKDMEEKIQRLESNIEIIKTKLAKIMAEFTSSQSKIKQRITSIESTVKSVRPEDISEVVA
DNKTP
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatctgcacagaccagtcctacccggcaacgaccaggcaacagccgcttctc
ggcacgtccgatgatgacctggactccatcgacaacggaacctccagagccaactcagag
tgtgaagacacattgtcagaggttcagggtgctgtctctgtgttaactagccgacacaca
gagtctcacagagattcctttacagggtcaggagccctggccaggctctctcacttcctg
ttcatgctgcggacctgggcctctcacaagatgcaccacgaggtggagagaccagactcc
tttctggaacgcttcaggggccctgagctcaaagaggcctccagcagagagagcaacgca
cagtcactgggataccccgacagagtccgcaagaggaagaaagagatttggatcatggac
ccatcagcagacagatactacagatggctaaccatcatcgcagcaccatgcttctacaac
ctgatgatgctagtgaccagggcatgttttaatgaactccagagcacgtacataactctg
tggattgtcctggactacacctcagacttaatctactacacagacacattcgtcaggtct
agaacaggttttctggaacagggactgcttgtgaaagacgacaagaagcttagagacaaa
tacaaatcaacgccacagttcaaatgggacatgatttcaatgatacccacagacctgctg
tttctgaaagtgggtttaaactaccccgagctccgactgaaccgactcgcaaagatgaac
cgtctctttgagttctttgaccgcactgaaaccagaaccagcttccccaacgttttccga
atcagtaacctggtactttacatcctgatcatcatccactggaacgcctgcatcttcttc
gccatctccaagaccatcgggttcgggtccgacacctgggtgtacccaaacatcagtcat
cctgagcacggccgccttgccaggaagtacatctactgtctctattggtcgaccctgacc
ctgaccaccattggagaaaccccgccaccagttagagactttgagtacctctttgtggtc
gtcgacttcctcatcggtgtgctgattttcgccaccatcgttggtaacgttggtgccatg
atctcaaacatgaacaaaacccgtgcggaattccaggctaagatcgactccatcaagcaa
tacatgcagttccgtaaggtctccaaggatctggaggtcagggtcatcaagtggttcgac
tacctctggacggagaagaagacctgcgatgagaaggaggtgctgaagaacctgccagac
aagctgaaggccgagatcgccatcaacgtccatctagacaccctgaagaaggtgcgtatc
ttccaggactgtgaggctggtcttctgattgagttggtgctgaagctgcagcctcaggtg
ttctccccaggagattacatctgtaagaagggagacatcggcagagagatgtacatcatt
aaggaagggaagctggctgtggtggcagacgacggggtgacacagttcgtggtgctcagc
gatggagcgtacttcggagagatcagtatcctgggcatcaagggttccaaggctggcaac
aggagaacggccaacatcaggagcataggttactctgacctcttcgccctgtcgaaagac
gatctcatggagtccctcactgagtaccccgatgccaagaaggctctggaagaaaaggga
aaggctatgctgatgaaagacaacatgatcgatgaggacgtcgctaacgcgggtgccgac
cctaaggacatggaggaaaagatccaaaggttggagagtaatattgaaatcatcaagact
aagttggccaagatcatggctgagttcacatccagccagagcaagatcaaacagaggatc
accagcatagagtcaacagtcaagtcagtccggcccgaggatatatctgaggtggtggcc
gacaacaagactccttag
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