Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410405
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Entry
139410405 CDS
T10872
Name
(RefSeq) thyroid adenoma-associated protein isoform X1
KO
K24169
thyroid adenoma-associated protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Other domain-containing proteins
Armadillo repeat domain-containing proteins
139410405
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139410405
NCBI-ProteinID:
XP_071011898
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Position
1:63788299..63892371
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AA seq
1942 aa
AA seq
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MVTKKKTVKVEAVVLDKDRRDKLIVSLSVDGGDEWIRQLAQTLQDCLALTDPMQQIQLVK
KAGSQLELLSEEETSRGPLLQACLHTMALIYTSLLAKNPLRRASASALSSVPDWLQEQTV
ICLSACLSESLSTVGSDHSSYSHLIDSITACLDAFPLGERCIHRLLAEVLPFLHKALSEY
LKLNSGLAGRHVVQAQLMHSCLAAVKASMLVVQRSQELISAALQAVHPHCTLQLTLSGLL
DCYTHILTDENFLQAVQSTAGMAVVLLTRSVMGSGDRVAAVVAGLLQGSEQSGECAPVWL
TQSCTGLYDSGRPAGVSLYLCHGALAMLNWRGATQGPQREQLLLLVPHTLLALDTSVKES
STAMVVARVLTLWSGAALESLQGGLSSPPGLLHDSLRGGSELQGHLLEHVYTHWEHPLDG
VRHQTRALFKNLLLLHQHSSPLAFSDPYRDPYFTQLTHNLLGLEWHQRGKYGSLACLVEL
LGAGYLLALDPQLPSRLLGLMGDQTLAPYASDLLERLFVSHKAQLVEEGGTGGTEAGMER
WHQTWVTPLLQVLCRARLDQTTYILDYFLPKLLRCSPSSLAHMVQALQVTPPCSAGPPGS
RGALGALMTCLRAARAQGVVQSEEGLWGGLVPLFLLRQALVHKHDQVRMDALGLLCESHR
RTEVLTSQEMELLHHFLPSSLNSQSPGVRQLTVSLLKKLLCRVKDSGQSLQRRLVQERDQ
GQKDRDQHILDTYKEFLCWLCESLFGVLLPGASFSTCLTALHLLCQLAHLFTFNTGSDDV
FALGEVVTPAQAQNVLYCVASNFLEVKQLASALLRQLPPSAVGLQEPGRMQTLLQAALDL
STSTKPFDSVTAAHLFNLFLRQPALPQALLLCAQEQGLSFQPPALTQPQAFEALTLETNT
LAVVQYLLLCLKAEVVKAESSLLLAAASYPLYGRAHCITAALQQLNTGCLTLTGQWRNVM
SELITVSYRMSDVVSPVVQSSSPEGLIPMDTDSETSAGLQRILQEIQPRDTNDFFTSVRE
LDTEPSGQENGPAAPTDRPQHDSTGGSGEGYRVTAQMVLVCCWRSMKEVSMVLGQVCQSL
PLQTSSKHSDQGLITEEQVEGVGLYFRQQLLQSRHRGAFELAYVGFVRLTDMLRRSGSRT
LQQLPGRWLTEVLQEVKSSDPSSKLCATRRSAGIPFYIQALLSSEPKSSSCSLLKMTMRE
LTALAMPSPDRATDQTTVPQVHALNILRALYRDTRLGENIIPFVSEGMQAAVLGFTSPVW
AVRNSSTLLFSTLITRIFGVKKGKDEHSKENRMTGREFFTRFPALYPFLLSQLEEAAASV
DSDRGQVILHPSLFLLLLVLGRLFPSPMDGSSSPLGLAPFMPFIIRCGRSAVYRTREMAA
RALVPFVMVTQVPSTIQTLLEDLPLEAGPRTQQNHIHGILLQVLFLLRSYQTDTHRPQAA
GSDISQALRPRLWLASRQNLCLVTRAVFVDVLGAVCGALAAPVGDSELKELREETLALLM
ASELVTPGGPSAVCDPPGTTQYLLSLARLALSASVESPLLWGMEEDGNTSRGPLLLGCLL
QCPHYEVRELALGEVLKRLERERDEEKGEGERSSHWPQETIISNLTTLALHEAHPQSLAK
VLQVLSVLSVNSDLLWRDGLRNLTQTEVLERVLTLAEGFAHSVELHCASLTLASRLVVHL
VHSDPQGVAAVACLGRWGALVSQSCGVEQNAEVKMMAADVLVNATPTLLTSPNLPLGVSH
TVSLWRGLFTLLQDEDQDVRDRAADFISNLPTHLLNPDVACVSVCPPVALDMGVGLLCQL
FQLWGQVPMGIFTLTEWLLGDQEQETATAEATGLDEEDFLFEKGDLNLWAEPVQWARLLH
RHLGVLFKAPGLTALNQNQAELLRLSAQAEALSLATQQALEGLPALPQFSCTIEHARLAL
QQERATLALAILGTLRQTGLSG
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atggtgacaaagaagaaaacggtgaaagtggaggctgtggtattggacaaggacaggcgt
gacaagttgatagtgtctctctctgtggatggaggagatgagtggatcagacagcttgcc
cagaccttgcaggactgtctggcgttgactgacccaatgcagcagatccaactggtcaag
aaggcaggatctcagttggagctgctgagtgaggaggaaacttcccgtgggcctctcctc
caggcctgtctgcacaccatggccctcatctacacctccctgctggccaagaaccccctc
cgtagggccagcgccagtgccctgagctctgtaccggactggctgcaggagcagactgtc
atctgtctgtccgcgtgcctgtcggagagtctgtccactgtgggctcagaccacagctca
tactcgcacctaatagactctatcacagcttgtctagatgccttccctctcggtgagagg
tgtatacacaggctgctagcagaggtgttaccgttcctccataaggccttgagtgaatac
ctcaaactcaacagtggtctagcaggtcgccatgtggtccaggcccagctcatgcactcg
tgtctggctgcggtgaaggcctccatgctggtggtgcagaggtcccaggagctcatcagc
gccgccctacaggcagttcatcctcactgcaccctgcagctcaccctcagtggcctactg
gactgctacacacacatcctcacagatgagaacttcctgcaggcggtgcagagcacggct
ggcatggcagtggtcctgctgacccggtctgtcatggggagtggagatagagtggccgca
gtggtggcaggtctcctgcaaggttcagagcagagtggtgagtgcgcccccgtgtggctg
acacagagctgtacggggctgtatgacagtggccgtcccgcgggggtgtccctctacctg
tgtcatggggccctggctatgctaaactggagaggggcaacccaggggccacagagggaa
cagctgctgctgctggttcctcacacactactggcgctggacaccagtgtaaaggagtcc
agcacagccatggtggtagctcgcgtgctgaccctgtggagcggagccgccttggaaagc
ctgcagggtgggctgtcgtctcccccaggcctgcttcacgactccctccgcgggggctca
gagctccaggggcacctgctggagcacgtctacacccactgggagcaccccttggatggg
gtccgccaccagacccgcgccctcttcaagaacctcctcctcctgcaccagcacagcagc
cctctagccttttctgacccctacagggacccatactttacccagctaacccacaacctg
ctgggcctggagtggcaccagagagggaagtatggctctctggcctgcctggtggagctc
ctaggggcagggtacctgttggctctggacccccagctgccctcacgtctcctgggcttg
atgggggaccagaccctggcaccttacgctagcgacctgctagagaggctgtttgtcagt
cacaaggcccagctggttgaggaaggtggcacagggggcacagaggcgggcatggagagg
tggcaccagacctgggtgaccccattgcttcaggtgctgtgtagagccaggctggaccag
accacatatatcctggactatttccttcccaagctgctgcgctgttccccctccagtctg
gcccacatggtacaggccctacaggtcaccccaccctgcagcgcaggacctccgggcagt
aggggtgctttgggtgctctgatgacgtgtctgcgtgcagcacgtgcccagggggtggtc
cagtcagaggaggggctgtgggggggacttgtacccctctttctgctccgtcaggctctt
gttcacaaacacgaccaggtgcgaatggacgctcttgggttattgtgcgagagtcatcgt
cgcacagaggttctgacctcgcaggaaatggagctgcttcatcacttcctgccctccagt
ctaaacagccaatcaccaggagtcaggcagctgactgtcagcctgctcaaaaagctgctg
tgcagagtgaaggatagtggtcagtcactgcagaggaggctggtccaggagagagaccag
ggacagaaggacagagaccaacacatcctggacacgtacaaggagttcctgtgctggctg
tgtgagagcctgttcggtgtgcttctccccggggcctccttctccacctgcctgacagcc
ctccacctgctgtgccagctggcccacctcttcaccttcaacactgggtctgatgatgtg
tttgctctgggagaggtggtgacccctgcacaagcgcagaatgtcctctactgcgtcgcc
agcaacttcctggaggtcaagcagctggcctccgcgttgctacggcaactccctccgtct
gccgtggggctgcaggagccaggcaggatgcagactctgctccaggcagctttggacctc
agcaccagcaccaagccttttgacagtgtcacggctgcccacctcttcaaccttttcctc
cgccagcctgccctgccccaggccctgttgctctgtgcccaggagcagggcctctccttc
cagcctcctgctctaacccagccccaggcttttgaggccctcacccttgagacgaacact
ctggcagtggtgcagtacttgttgctgtgtctgaaggctgaggtggtgaaggcagagtcg
tctctcctgctggcggcagcctcctaccctctctacggccgagcccactgtatcactgct
gccttacagcaactcaacaccgggtgtctgactctgacaggccagtggaggaatgtgatg
tcagagctcatcacagtgtcctataggatgtctgacgtagtgtcacctgtcgtccagagc
tcctcccccgaaggcctcatccccatggataccgactcagaaacgtccgctggtcttcag
aggatcctgcaggagatacagcctcgcgacaccaacgactttttcaccagcgtcagagaa
ctggacaccgagccgtctggacaggagaacggacctgcggcccccacagacagaccacag
catgacagcacaggtggtagtggtgagggctacagggtgaccgctcagatggtgttggtg
tgctgctggaggagtatgaaggaggtgtccatggtgctgggtcaggtgtgtcagagcctc
cccttacagacctccagcaaacactctgaccaggggctcatcaccgaggagcaggtggag
ggggtgggcctgtacttccgtcagcagctcctccagtctcgtcaccgaggggcctttgag
ctggcctatgtgggctttgtacgtctcactgacatgctgcgcaggagtggaagcagaacc
ctgcagcagctgcctggtcgctggctcacggaggtcctacaggaggtcaagtccagcgac
ccctcctccaaactgtgtgccacgcgccgcagcgcaggcatcccattctacatccaggcc
ctgttgtcatccgagcccaagtcgtccagctgcagcctgctgaagatgaccatgagagag
ctgaccgccctggccatgccctctcctgacagagccactgaccagaccactgtccctcag
gttcatgctctcaacatcctgagggctctgtacagagacactcgtctgggggagaacatc
attccctttgtctctgagggaatgcaggctgctgtcctgggcttcacctcccctgtctgg
gctgtgaggaactcctccaccctgctcttcagcactctgatcacgaggatctttggagtg
aagaaagggaaggacgagcactccaaagagaacaggatgacgggccgggagttcttcact
cgtttcccggcgctctatcccttcctcctgagccagctggaggaggctgcagcgtcggtg
gacagtgacaggggtcaggtgattctgcaccccagcctgttcctgttgctgctggtgttg
gggcgtctcttcccctcacccatggacgggtcttcttcccccctgggcctagcccccttc
atgcctttcatcatcaggtgtggtcgttctgcggtctaccggacccgtgagatggccgcc
cgggccctggtcccattcgtcatggtaacccaggtcccctccaccatccagactctactg
gaggacctgcctctggaagccgggcctagaacccagcagaaccacatccacggaatcctg
ctccaggtgctgttcctgctgcgctcctaccagacggatacacacagaccccaggcggca
ggaagtgacatcagccaagccctgcgcccacgactgtggctcgcctccaggcagaacctg
tgtttagtgacccgagctgtgtttgtggacgtgctgggggccgtgtgtggagccctggct
gctcctgttggagactccgagctaaaggagttgcgtgaggaaacgctggcactcctgatg
gcctctgagctggtgacccctggaggcccctctgctgtgtgtgacccccccggcactacc
cagtatctcctcagcctggcacgcctggcactcagcgccagtgtggagagcccactgctg
tggggcatggaggaggatggcaacacatcgcgaggacccctgctcctggggtgtctgctg
cagtgcccgcactacgaagttcgtgagctggccctgggagaggtcctgaagaggctggaa
agagagagggatgaagagaagggggagggggagagaagctctcactggccccaggagacc
atcatctcaaacctcactaccctggccctgcatgaggcccaccctcagtctctggccaag
gtgctgcaggtgctgtctgtcctcagcgtgaactctgacctgctgtggagggacggtctg
cggaatctgacccagacagaggtcctggagcgggttctcactctggctgaaggctttgcc
cacagtgtggagttgcactgtgcttccctgaccctggcctctagattggtggtgcaccta
gtacacagtgaccctcagggtgtggctgcagtagcgtgtctggggcgctggggggcgctg
gtgtctcagtcctgcggtgtggagcaaaatgcagaggtcaagatgatggctgcagacgta
ctggtcaacgctacacccaccttgttgaccagccccaacctaccattgggtgtgtcccac
acagtgtctctgtggagaggtctgttcactctacttcaggacgaggaccaggatgtccga
gacagagctgctgacttcatctccaacctccctacacacctactgaacccagatgtggcc
tgtgtctcggtgtgcccacctgttgccctggacatgggtgtggggttgctatgccagctg
ttccagctgtgggggcaggtgccaatgggcatcttcaccctgacagagtggctgctggga
gaccaggagcaagagacagccacagcagaagcaactggcctggatgaagaggacttcctg
tttgagaagggcgatctgaacctttgggccgagcctgtccagtgggcacggctactacac
agacacctgggtgtcctcttcaaggccccagggttgacggctctgaaccagaaccaggca
gagttgctcagactttcagcacaggcagaggccctatccctggccacccagcaggctcta
gagggcctcccagccctgccccagttttcctgcaccatagagcatgcccggctggcccta
cagcaggagagggccacactggctctggctatactggggaccctgagacagactgggctg
tcaggctga
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