Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410543
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Entry
139410543 CDS
T10872
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139410543
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocla01007
]
139410543
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139410543
Enzymes [BR:
ocla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
139410543
Amino acid related enzymes [BR:
ocla01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
139410543
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
139410543
Prokaryotic type
139410543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
139410543
NCBI-ProteinID:
XP_071011914
LinkDB
All DBs
Position
6:complement(844157..877845)
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AA seq
721 aa
AA seq
DB search
MAEKSMAEQMKELKVDDGKKGGGAKDGEKKKKKAAAGDAGGKTELSPPPGYMEERLSLYT
KLKEEHDALMAERAEKDSKSIKVTLPDGKVVEAESWKTTPYQVAAGISQGLADATVIAKV
NNSVWDLDRPLEENCSLQLLKFDDDEAKAVYWHSSAHIMGEAMERVYGGCLCYGPPIENG
FYYDMFLDQEGVSSNDFPCLENLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCRILNE
KVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYGISF
PDPKMLKEWERFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGSYIYNSLVDFIRS
EYRKRGFQEVVTPNIYNSKLWQTSGHWQHYSDNMFSFEVEKEVFALKPMNCPGHCLMFDH
RPRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMDQIEEEIKGCLDF
LRTVYDCFGFSFKLNLSTRPEKFLGEPAVWDQAEKQLENSLNEFGEKWVLNPGDGAFYGP
KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKQRPVIIHRAILGSVERMIA
ILTENYGGKWPLWLSPRQVMVVPVGPTLDDYAQKIRDDFHRGGLMTDVDCDASCTLNKKI
RNAQLAQYNFILVVGEKEKTSETVNVRTRDNKVHGERSVNECMERLKQLKASRSRNAEEE
F
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaagagcatggcggagcaaatgaaggagttgaaagttgacgacgggaaaaag
ggaggaggagccaaagatggagagaagaagaagaagaaggctgcagcgggagacgctggt
gggaagacggagctgtcccctcctcccgggtacatggaggagcgtctgtccctgtacact
aaactgaaggaggagcatgatgctctgatggcagagagggcagagaaggacagtaaatcc
atcaaggtgactctgccagatgggaaggtggtggaggctgagtcctggaagaccacaccc
taccaggtggctgctggcatcagtcagggtctagctgacgccacagtgatagctaaggtg
aacaactctgtgtgggacctggaccgacctctagaggaaaactgcagtctgcagctactc
aagtttgatgacgacgaggctaaagctgtgtactggcactccagtgcccacataatgggt
gaggcaatggagagggtctacggaggctgcttgtgttacggtccgcccatcgagaacggc
ttctactacgacatgttcctggaccaagagggggtgtccagtaatgacttcccctgcttg
gagaacttgtgtaagaagatcatcaaggagaagcagcccttcgagaggctggagatcaag
aaggagactctcctggagatgttcaagtacaacaaatttaagtgccggatcttgaatgag
aaggtgaccaccccaaccactactgtgtacaggtgtggtccgctgattgacctgtgccga
ggaccccatgtccgacacactggaaagatcaaggccctgaagatccacaagaactcctct
acctactgggagggcaaggctgacatggagactcttcagaggatctacggcatctccttc
cctgatcctaagatgctaaaggagtgggaacgcttccaggaggaggccaagaacagggac
caccgcaaactgggacgggaacaggatctgttcttcttccatgatctgtctccaggcagt
tgtttcttcctgcctaaaggatcctacatctacaacagtctggtggactttatcaggtct
gagtaccgtaagcgaggcttccaggaggtggtaacccccaacatctataacagtaagctg
tggcagacatcaggccactggcagcactacagtgacaacatgttctccttcgaagtggag
aaggaggtgttcgccctcaaacctatgaactgcccgggacattgtctgatgtttgaccac
cggccgcggtcctggagggagctgcctctgcgaatggctgacttcggcgtgctgcatcgt
aacgagctgtctggcgctctgactgggctgacccgtgtacgacgcttccagcaggacgat
gcccacatcttctgcaccatggaccagattgaggaggagattaagggttgtctggacttc
ctgcgtacagtctacgactgttttggtttctccttcaaactcaacctgtccacccggcct
gagaagttcctgggagagcctgcggtctgggatcaggctgagaagcaactggagaacagt
ctgaatgagtttggcgagaagtgggtcctcaaccctggagacggggccttctacggaccg
aagattgacatccagatcaaggatgctattggtcgataccaccagtgtgccaccatccag
ctggacttccagctaccaatccgcttcaacctcacctttgtcagccatgatggagacgat
aagcagaggccagtcatcatccacagagccatcctgggatcagtagagaggatgatcgct
atcctcactgagaactacggagggaaatggccgctgtggctgtctcctcgtcaggtgatg
gtggtacctgtaggacccacactggatgactatgctcagaagatccgtgatgatttccac
cgtggaggtctgatgacagacgtagactgtgatgccagctgcaccctgaacaagaagata
cgcaacgcacagctggcacagtacaacttcatcctggttgtgggagagaaggagaagacc
agcgagacggtgaacgtgcgtacgcgtgacaacaaggtgcacggagagcgcagcgtcaat
gagtgtatggagcgtctcaaacagctgaaggcctcacgcagccgcaacgcggaggaggaa
ttctga
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