Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410603
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Entry
139410603 CDS
T10872
Name
(RefSeq) netrin receptor UNC5C
KO
K07521
netrin receptor unc-5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139410603
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139410603
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
DCC/UNC5 family
139410603
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Ortholog
Paralog
GFIT
Motif
Pfam:
UPA
Unc5_NetrinR_N
ZU5
Death
Ig_3
I-set
TSP_1
TSP1_spondin
Ig_2
ig
VEGFR1-3_N_Ig-like
TSP1_CFP_C
DUF6724
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
139410603
NCBI-ProteinID:
XP_071012012
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Position
6:complement(10169486..10366459)
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AA seq
880 aa
AA seq
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MEPEEAYIVKNKPVNLYCKATPATQIYFKCNSEWVHQKDHTVEERVDENSGLVVREASIE
IFRQQVDELFGPEDFWCQCVAWSSAGTTKSRKAHVRIAYLRKTFDQEPLGKEVSLEQEVL
LQCRPPEGIPAAEVEWLKNEEIIDPADDRNFYITIDHNLIIKQARLSDTANYTCVAKNIV
AKRRSTTATVIVYVNGGWSTWTEWSVCNSRCGRGYQKRTRSCTNPAPLNGGAPCDGQATQ
KLACTSLCTVDGLWTEWSKWSTCGTECTHWRRRECNAPAPKNGGKDCDGMVLQSQNCTDG
LCMQSSLYQLSTEPNADSDLGFSSAPSTENMALYVGIVIAVIMCLVISVIVALFVYRKTH
RDFDSDIIDSSALNGGFQSVNIKTARSADLLTAPPDLTNAAAMYRGPVYALHDVSDKIPM
TNSPLLDPLPNLKIKVYNSSGLVTPSEDLSDFSSKLSPKVTQSLLDSENMNLRNQSLART
RDPSCTAAGSFNSQGGHLIVPNSGVSLLVPAGAVPQGRVYEMYVTVHRKDSMRPPVEDVQ
TVLSPVVSCGPPGALLTRPVILTIHHCAEADGDDWQIQLKNQLNQGQWEDVVVVGEENFT
TPCYIQMDEEACHLLTETLGTYCLVGQSVSKAAAKRLKLAIFGPVSSTTLEYHIRVYCLD
DTQDALKEVLQMETQMGGKLLDEPKTLNFKDSTHNLRLSVHDVPHGQWKSKLLAKYQEIP
FYQVWSGCQRTLHCTFTLERFSSSTTELSCKLCVRQVEGEGQIFQLSSTLSEDTQNIDTS
LMDPASNITTLVGLNAFRIPLSIRQKLCGSLDAPQTRGSNDWRMLAHKLNLDRYLNYFAT
KSSPTGVILDLWEAQHFPDGNLNRLAAVLEEMGRHDSLVP
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgaggaggcgtacatcgtcaagaacaaaccagtcaatctctattgcaaggcc
acgcccgccactcagatttacttcaagtgcaacagtgaatgggttcaccagaaggaccat
acggtggaggagagagtggacgagaactcaggactggtggtgcgtgaggccagcatcgag
atctttcggcagcaggtagacgagctatttgggccagaggacttctggtgtcagtgtgta
gcctggagctctgcaggaaccaccaagagtcgtaaagcccacgtacgcatcgcatatctc
aggaaaacgtttgaccaggagccactggggaaggaggtgtcactggaacaggaagtgctt
ctccagtgccgcccacctgagggcatacctgctgcagaggttgagtggttgaagaacgag
gagatcattgacccggctgatgaccgtaatttctacatcaccattgaccacaacctgatt
ataaagcaggccagactgtcggacacggccaactatacgtgcgtggccaagaacattgtt
gccaagaggagaagtactactgctactgttattgtctatgtgaacggcggctggtcgaca
tggacagagtggtcagtgtgtaacagtcgctgtggccgtggttaccaaaagcgtacccgc
agctgtaccaatcccgccccgctcaacggaggagccccctgtgatggacaggcaacccag
aagctggcctgcacctccctctgcactgttgacgggttgtggacagagtggagtaagtgg
tctacttgtggtacagagtgcactcactggcgcaggagagaatgcaatgcccctgcaccc
aaaaatggaggcaaggactgcgatggtatggtcctacagtcccagaactgtacggacgga
ctctgtatgcagagttcattatatcagctgtccactgagcctaatgccgacagtgatttg
ggattttcatcggcccccagcacagaaaacatggcgctctacgtaggcatcgtcatcgct
gtcataatgtgtctggtcatctccgtcattgtggcgctcttcgtctaccggaaaacccac
cgggactttgactctgacatcatcgactcatcagccctcaacggaggcttccagtcggtc
aatataaagacggcgcgctcagctgacttgctgaccgctcccccggacctgaccaacgct
gcggccatgtaccgcggccccgtctacgccctgcacgacgtgtccgacaagatccccatg
accaactcgccccttctggaccccctgcccaacctgaagatcaaggtgtacaactcctct
ggcctggtcactccttcggaagacctgtctgacttctcctccaagctgtcccctaaggtc
acccagtccctgctggacagtgagaacatgaacctgcgtaaccagagcctggctcggacc
cgagacccctcctgcaccgccgcaggatccttcaactcccagggaggacacctcattgtg
cccaactcaggtgtgagcttgctggtgccagcgggtgctgttcctcagggtcgtgtgtat
gagatgtacgtgacggtgcacaggaaggacagcatgaggccaccggtagaggatgttcag
acagtgttgagccccgtggtgagctgtggtcccccaggggccctcctgacccgcccagtc
atcctcaccattcatcactgtgccgaggccgacggagacgattggcagatccagttgaag
aaccagctgaatcagggccaatgggaggacgtggtagtggtcggggaggagaacttcacc
acaccctgctacatccagatggatgaggaggcatgtcatctactgacagagaccctgggg
acctactgcctggtgggccagtccgtcagcaaggctgccgccaagcgcctcaaactggcc
atcttcggccctgtgtcaagcaccacactggagtaccacattagagtctactgtctggac
gacacccaggacgcactcaaggaggtacttcagatggagacccagatgggagggaagctg
ctggatgaaccaaagaccctgaacttcaaggacagcacccacaacctgcgcctctctgtc
cacgacgtcccccacggacagtggaagagcaagctgctcgccaagtaccaggagatcccc
ttctaccaggtgtggagtggctgccagcgaacacttcactgcaccttcaccctggagcgg
ttcagctccagcaccacagagctcagctgtaagctgtgtgtacgccaagtagaaggggag
gggcagatctttcagctcagcagcactttgtctgaggatacccagaacatcgacacgtct
ctcatggacccggctagcaacatcaccaccctggtggggctcaacgccttccgtatccct
ctctccatcagacagaagctctgtggcagccttgacgcgccccagaccagaggatccaat
gactggaggatgctggcccacaaactcaacctggacaggtatctgaactattttgccacc
aagtccagtcccacaggggtgatcttggacctgtgggaggcccaacacttcccagacggg
aacctcaacagactggctgccgtgctggaggagatgggtcgccacgacagcctggtccca
tga
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