Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410613
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Entry
139410613 CDS
T10872
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139410613
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GFIT
Other DBs
NCBI-GeneID:
139410613
NCBI-ProteinID:
XP_071012022
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Position
6:complement(10882694..10906189)
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AA seq
1020 aa
AA seq
DB search
MSLFNLDRFRFDNNKTSNQDKYTGSVSPESEKENKPARVTTPIANLGKYGRGVVFEDVIS
DPDDDLASDSRRDKLTKVVNSFREPVKLEVREMTEPYDKEDQVDKALEERLDKLQEIFPK
RNRKELLEVIESTSTLDGAVASCLMMFGDKDSKRNRKPDGSSSCRDKDVVQQPSKRRRTS
LAEDSEEKGAEPNWERQETMVRKLQRKFPDQDKEELRAVLQEHEWNIADALEVLRMFSDP
EEYTSSPEVKQKEPKAKSDTKPSNSKSDAKPSRESKDSMEEAKPSRESKDGMEEVKPSKA
SPLKWMFKKFAPESKPTSSSNLQSLKMSNGTSMARKEAVERKRKAHTSDERASSSEDEEA
TSSEFEGEDEELDSGAEDEGTSTLQGQILLFFQEASLDELSLITGCSLKKAKKIVELRPF
AFWHKLKELFHKEKGLSVELLLGCRVVLRERAVVQGLMSKCQNISGKMVKGVSQVIDNGM
GSMTQPSILNRKLKLKPYQLIGLKWLLLLHQHKLSGILADEMGLGKTIQAIAFLARLYQD
GIKGPHLITVPSSTLDNWVRELKLWCPSLKVLVYYGSMEDRQYLRHDILNNRVDFHIIVS
TYNLAIGNDSDRSLFRKLKLKYAVFDEGHMLKNMKSLRYRHLMAINAEHRLLLTGTPVQN
NLLELMSLLNFIMPSMFSSSTTQIAKMFSMKSHEEQSRFERDRIAQAKLIMKPFILRRVK
SEVLKLLPAKEEKLVFCPMSEKQQQLYQTMVGRFKKSAIGEKRELCNVMMQLRKMANHPL
LHRQYYTTERLEAMSSLMLKEPTHFDADPVLIQEDMAVMSDFELHRLCQQYSSLDKYQLG
KDLLLDSGKFHLLQTLLATLKTKGDRVVLFSQFTMMLDILEILLKHLGHRYIRLDGSTPL
ADRIVLIDDYNTDPEIFVFLLSTRAGGLGINLTSANVVIMHDIDCNPYNDKQAEDRCHRL
GQTRTVQVIKLIQKDTIEGCMLQLGQKKLKLEQAMTAAEEGDEGTIPEDMASLLKASLGL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttaatttggaccggtttcgttttgacaataataaaacgtcaaaccaggac
aaatacaccggttccgtaagtccagagtcagaaaaggagaataaaccagcacgagtaaca
acacctatagccaaccttggaaaatatgggcgaggagtagtgtttgaagatgtcatcagt
gaccctgatgacgatttggcaagtgattcgaggagggataaattaacgaaagtggtgaat
tctttcagggaaccagtgaagctagaggtaagagagatgactgagccatatgataaggaa
gaccaagttgacaaggcgctggaagagagactggacaaactgcaggaaatcttccctaaa
agaaacaggaaggagttgttggaggtgattgaaagcacaagcactttagatggtgccgta
gcctcatgcctgatgatgtttggtgacaaagactcaaagaggaataggaaaccggacgga
tccagcagttgtcgagacaaagatgtggtccagcagcccagcaagaggaggagaacgtct
ctggctgaagactctgaagagaagggcgcagagcccaactgggaaagacaggagaccatg
gttaggaaactgcagaggaaattccctgaccaggataaggaagaactcagggctgtgctc
caggaacacgagtggaacatagccgacgccttggaggtgcttcgcatgttctctgaccca
gaggaatacaccagctcccctgaagtcaagcaaaaggaacccaaagccaagagcgacacc
aaaccaagcaacagcaagagtgacgccaagccaagcagagagtccaaggacagcatggag
gaagccaagccaagcagagagtccaaggacggcatggaggaagtcaagccaagcaaagct
tcccctctgaaatggatgttcaagaaatttgcccctgaatccaaacctacctcctcttca
aatttgcagagcctgaagatgtccaacgggaccagcatggctagaaaggaggcagtggag
aggaagaggaaggctcacacctctgacgagagggccagcagctcggaggacgaggaggcg
accagcagcgagtttgagggcgaggatgaggagctggactctggggcggaagacgagggc
acatccacgctacaaggccagattctgctcttcttccaggaggcctcgctggacgagctg
tccctcatcaccggctgttcgttgaagaaggccaagaagattgtggagctgcggcctttt
gctttttggcacaagctgaaggagctgttccacaaggagaaaggcctgtctgtggagctg
ctgctgggctgcagggtggtgctgagggagagagccgtggtccaaggtctcatgtccaag
tgccagaacatctcgggcaagatggtgaagggagtcagccaggtcatcgacaacggcatg
ggctccatgacccagccctccatcctcaacagaaagttaaaattgaaaccctaccagttg
attgggctgaagtggcttctcctgctgcaccaacacaagctgagtggaatcctggctgat
gagatgggtttggggaagaccatccaggccatagccttcctggccaggctgtaccaggat
ggcatcaaaggcccccacctcatcactgtgccctcctccaccctggataactgggttcgg
gagctaaagctgtggtgccccagtctcaaggtgctagtctattacggctctatggaggac
cggcagtatctgcgacatgacattctgaataatcgggtggacttccatatcatcgtgtct
acatacaacctggccatcggcaacgacagcgaccgcagtctcttccgcaagctcaaactg
aagtacgccgtgtttgacgagggccacatgctgaagaacatgaagtccctccgttaccgc
cacctcatggccatcaatgctgagcaccggttgctcctgaccggcacccctgtgcagaac
aacctgctggagctgatgtcgctgctcaacttcatcatgccctccatgttctccagcagc
accacgcagatagccaagatgttctccatgaaatcccatgaggagcagagtcgtttcgag
agggaccgcatcgcccaggctaaactcatcatgaaacctttcatcctcagacgagtcaag
agtgaggttcttaagctgctgccagcaaaggaggagaagttggtattctgcccaatgagt
gagaagcagcagcagctttaccagaccatggtgggcaggttcaagaagtctgccatcgga
gagaagagagagctgtgcaacgtgatgatgcagctgaggaagatggccaaccaccctctg
ctccaccgacagtactacaccacagagagactggaggccatgagtagcctcatgctcaag
gagccgacccattttgatgcagacccagtgctgatccaagaggacatggctgtgatgtct
gactttgagctccacaggctgtgccagcagtactcgtccttggacaaataccagctgggc
aaagaccttctactggactctgggaagtttcacctgctccagacactacttgccacgctc
aagaccaagggagaccgagtagtgctcttcagtcagttcaccatgatgctggacatccta
gagattctgctcaaacacctgggccaccgctacatcagactggacggctccacgccctta
gcagacaggatcgtgctgattgatgactacaacacagacccggaaatctttgtgttcctg
ctgtcgacgcgggccggaggcctgggtatcaacctgacctcggccaacgtggtcatcatg
catgacatcgactgcaacccttacaacgacaaacaggctgaggaccgttgccacagacta
gggcagaccaggacagtccaggtgattaagctgatccagaaggacaccatagagggctgc
atgctgcagctgggtcagaagaaactcaaactggagcaggccatgactgctgccgaggag
ggtgacgagggcaccatacccgaggacatggcctctctgctcaaagcatcactgggcctg
tga
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