Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410616
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Entry
139410616 CDS
T10872
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04625
C-type lectin receptor signaling pathway
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
139410616
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NCBI-GeneID:
139410616
NCBI-ProteinID:
XP_071012031
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Position
1:complement(65985527..65997121)
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AA seq
909 aa
AA seq
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MSEALRMDEAQYSMKMIENELMMNLSTYEFMPPVEVKSEPYIPETVHGPYIQILEEPKQR
GFRFRYECEGPSHGGLPGASSERNRRTYPTVKVSNYVGIARVEVQLVTHSDPPQVHAHSL
VGRHCCTESGKCSVDVGPNELTAQFSNLGILHVTKKGVGEVLFKRLRDEKRRQRGQHYHF
TDAEEQAILREANELGRIMDLNIVRLKFTAYLQDSNGGFSRALKPVVSNPIFDSKSPNAS
NLKISRMDKTSGSVLGGDEIFLLCDKVQKDDIEIRFYEEDGSWEAFGDFSPTDVHKQYAI
VFKTPPYHSTEIDRSVTVFLQLKRKKVGDCSDPKQFTYVPQIQDKEEVQRKKQKPLPYND
PWRGPLGGAGGAGRGAGGPGGAGFQFNQQMNGSGWMGGGFTCFGGGGAQMSGTTAQAEGT
QQQAGGMAGQMPGQTPGQTASPPLQQQLFQIAATLQSRATRMTKQTAGALLQYCTTGDVR
VLLAMQRHLCGVQDENGDTPLHLAIIHQQSAVIQQLVHTLLTIQQRKVLDKLNHLSQTPL
HLAVITRQVKVVDVLLRAGADPTLLDRDGRTPLHLAALAGDDVTLRVLLGHLGERYNHLV
NMADYHGLHPLHLAVCKGGERCLRLLVGSGAKINDPERGSGCSALHLAVRENLLKVACTL
ITELKADVNMCTFGGNTPLHLAASQGSPTLCSMLIAAGADKNLENDEPLFLSSSSSDEEQ
EDGPIRDFRELQIQQQPTIPPPLGKEQVNPRKRPATGHTPFDLTKCQKVRDLLDTRQRPK
SSQHSSKKPKPNSMDAESEQLDSETLHKLCELLSLGDVPWRQLAEKLNMLSLAHLYQESP
SPCYKLLENYKLGGGPVEGLVEALQSLGLTEGVRLLRRAELREDKQNTDQTVDSGFGSQP
MDEPALANQ
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagcactaagaatggatgaagctcagtacagcatgaaaatgattgaaaatgag
ctgatgatgaatttatcgacttatgagttcatgccacctgtggaggtcaagagtgagccc
tacatacccgagacagttcatggaccctacattcaaatacttgaggagcccaaacagaga
ggcttcagattccgctatgagtgtgagggtccgtcccacggtgggctcccaggggcctcc
agcgagaggaacaggagaacctatcccactgtcaaggtgtctaactatgtggggatagcc
agggtagaggtgcagctggtgacccactctgaccccccccaggtccacgctcacagtctg
gtggggaggcactgctgcacggaaagtggaaaatgcagtgtggatgtgggccccaatgaa
ctcacagcacagttcagtaacctgggcatcctccatgtcacaaagaaaggggtaggggaa
gtgttgttcaagagactgagagacgagaagaggagacaaagggggcagcactaccatttt
actgatgcagaggaacaagccatattgagagaagccaacgagctgggcaggatcatggac
ctgaacatagtgaggttaaagttcacggcctacctccaggacagtaacggagggttctct
agggccctgaagccagtggtctccaatcccatctttgacagcaagtcacccaacgcttcc
aacctgaaaatctcccgtatggataagacctctgggtctgtgctgggaggggatgagatc
ttcctactgtgtgacaaagtacaaaaagatgatattgagatccgcttctacgaggaggat
ggaagctgggaggcctttggtgacttctctccaactgatgtccacaagcagtatgccatc
gtgtttaagacacccccgtaccacagcacagagatcgatcgttcagtcactgtgttcctc
cagttgaaaaggaagaaagtgggagactgcagcgaccccaagcagttcacctacgttcct
caaattcaagataaagaggaggttcagcgtaagaagcagaagcccctcccctataatgac
ccatggagagggcctctgggaggggctgggggggcagggagaggtgccggaggaccagga
ggagcaggattccagtttaaccagcagatgaatggatcagggtggatggggggtggattc
acttgttttgggggtggtggagcccagatgtcaggcaccactgcccaggctgagggtacc
cagcagcaagctggagggatggccggacagatgccaggacagacgccaggacagacagcc
tcaccaccactacaacagcagctcttccagattgctgctactctccagagcagggccact
cggatgaccaagcagacagctggggctctcctacagtactgcaccactggggacgtccgg
gtccttctggcaatgcagagacacctatgtggggtccaggatgaaaacggagacacgcct
ttgcacctggccatcattcaccagcagtcagctgtgatccagcagctggttcatacactc
ctcaccatccagcaacgcaaagtcctcgacaagctcaaccacctcagccagactcctctc
catctggcggtgatcaccaggcaggtgaaggtggtggatgttctcctgagggccggggct
gaccccaccctgctggaccgggacggccggacccccctgcacctggcagcgctggccggg
gacgacgtcacactcagggtcctcctggggcacctaggagaacgttacaaccacctggtc
aacatggccgactatcatggtctccatcctctccacctggctgtttgcaagggaggagag
cgctgtctacgtctgctggtggggagcggggctaagatcaacgaccccgagcgggggagt
ggatgctccgccctccacctggctgttagagagaacctcttgaaagtggcctgcactctc
atcacagagctgaaagcagatgtaaacatgtgtacgtttggggggaacactcctctccat
ctggccgccagtcagggctcccccactctctgctccatgctcattgctgcaggagccgat
aagaatctggagaatgatgagccgctcttcttaagctcctcttcctctgatgaggagcaa
gaggatggaccaataagagatttcagagagttacagatccaacagcaaccaaccatccca
ccaccgttggggaaagaacaagtcaaccctcgtaagagaccagcaacaggacatacaccc
tttgaccttactaaatgtcaaaaggtgagagaccttctagacaccagacagagacccaag
tccagccaacactcaagtaaaaagcctaaaccgaacagcatggacgcagaaagtgagcag
ctagacagtgagacgctccataaactgtgtgagctcctcagtctgggcgatgtgccctgg
agacagctggcagagaaactcaacatgctctccctggcacacctgtaccaggagagtccc
tctccctgctacaaactgctggagaattacaagttgggtggcggtccagtggaaggactg
gtagaggctctgcagtctctgggtctgactgaaggagtgcgactgctgagacgggctgag
ctgagagaggacaaacagaacacagatcagacagtggacagcggctttgggagtcagcca
atggatgaaccagccttggccaaccagtga
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