Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410620
Help
Entry
139410620 CDS
T10872
Name
(RefSeq) semaphorin-6A-like isoform X1
KO
K06842
semaphorin 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139410620
NCBI-ProteinID:
XP_071012035
LinkDB
All DBs
Position
6:complement(11967619..12060696)
Genome browser
AA seq
1012 aa
AA seq
DB search
MRSEALLLYFTLLQIAGAGFPEDSEPISISHGNYTRQYPAFVGHKPGRNNTQRHKLDIQL
VMIMNRTLYIAARDHIYTVDTDTANSEEIFFSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQQNDDSLFVCGTNAFNPSCRTYKMDTMDAVGEDISGMARCPYDAKHSNVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKCLKEPYFVQAVNYGEFIYFFYREIG
MEYNTMGKVVFPRVARVCKNDKGGSQRVLEKQWTSFLKTRLNCSIPGDSHFYFNILQAVT
DVIHINGRDVVMATFSTPHNSIPGSAVCAYDMADVANAFTGRFKEQKSPDSTWTPVPEEK
VPKPRPGCCAGTPSLEKYKVSNEFPDDTLNFIKQHPLMDEAVPSITNRPWFLKTMVRYRL
TRIAVDSAAGPYRNHTVVFLGSEKGIILKFLAKMNSGFLNDSLFLEELNVYNPEKCSIDG
VDDKRIVSMQMDSQGHSLFVAFSSCVVKVPLSRCEKHGKCKKSCIASRDPYCGWVSEGAC
RQVVLDPKSAFEQDVEHGNTDGLGDCQNAFVALNDVQSSPHSHERPRHGHPTLPFPTTAH
PQAGGPLGRGGMVEQADPPMPSDKRDPYMAVPSQTQQDATGVIRESYQKGRDQLVPVTLL
AIAVILAFAMGAILSGILVYCVCDYRRRDVELTRRKDKDHVHDRRGSMNSVTKLTGLFET
GVKDGHPEAILTPLMHNGRLTNGKMLIKADQHHLDLAGMPTPESTPMQPRRKPSWGSREW
ERNQNLINACTKDLPPMGSPVISPDLALRASPGHIPSVVVLPQHQHQKAYQHEYVEQPHR
SDLSQMSLDDQGATLEYKALKSPCHGLNLVESDGLPPRVPQREASLTIPPAVPQMGKRLE
VHSSVYGHEFKRGYPMSAQKGSALKKHNTNSSNSSHMSRNPSFNRVEMPPPAPQRVDSMH
MTSQGMSLSRQPSISSYGSLPRTGVKHLKPDVPPKPSLVSLSTNVKSNDSCT
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaggccttgttgctgtatttcacgctactgcagattgccggggctggcttc
ccagaagactcggagccaatcagtatttcacatggcaactatacaaggcagtatccggct
tttgttggacacaaacctggaagaaacaatacacaacggcacaaactggacatccagctg
gtcatgattatgaaccgaacgttgtatatcgctgccagggatcacatatacacggtggat
acagacaccgccaactctgaggagatctttttcagcaagaaactgacatggaagtccaga
caggcagacgtggacacctgccgaatgaaggggaagcacaaggatgaatgtcacaatttc
atcaaggtcctcctacagcaaaacgatgactccttgtttgtgtgtggaacaaatgctttc
aacccctcctgtcgaacttacaagatggacaccatggatgctgtaggggaggacatcagt
gggatggcgcggtgcccatatgatgccaagcactccaacgttgccctgtttgctgatgga
aagctctactccgcaacagtaacagatttcctagcgatcgatgcagtcatttatcgtagc
cttggtgacagcccaacgttgcgcactgtcaaacacgactccaagtgtctcaaagagccg
tatttcgtacaggcagttaactacggtgaattcatctacttcttctatcgcgaaattggc
atggaatacaacacaatgggaaaggtggtgttcccccgggtggccagggtgtgtaagaat
gacaagggtggctcccagagagttctggagaaacaatggacttccttcctgaagacccgt
ctcaactgctccatcccgggagactcccacttctatttcaacatcctgcaggccgtcacc
gacgtcatccacatcaatggtcgcgatgtcgtcatggcaaccttctccacacctcacaac
agcatccctgggtcggccgtctgcgcctatgacatggctgatgtggccaatgcgttcaca
ggacgttttaaagagcagaagtccccggattccacctggacacctgttcctgaggagaag
gttccaaaaccaaggcccgggtgttgtgctggcacgccgtccttagagaagtacaaggtg
tccaacgagttccctgacgacaccctgaacttcatcaagcagcaccctctcatggatgaa
gcagtgccctctatcactaacaggccctggtttctcaagaccatggtgcgataccggctg
acccggatcgctgtagacagtgcagcgggaccctatcggaatcacaccgtcgtttttctg
ggatcagagaaggggatcattcttaaattcctggccaagatgaacagtggtttcctgaat
gacagtctcttccttgaggagctcaacgtgtataacccagagaagtgcagcatcgacggt
gtggacgacaagcggatcgtcagcatgcagatggacagccagggacactctctgttcgtg
gccttttcctcctgtgtagtcaaggtgccgctttctcgctgcgagaaacatggcaaatgc
aaaaaatcatgtattgcctccagggatccctactgcggctgggtgtccgagggagcgtgc
aggcaggtggtgctcgacccaaaatcggccttcgagcaggacgtggagcatggcaacaca
gatggactgggagactgccaaaatgcgttcgtggccctcaacgacgttcagtccagtcct
cacagtcatgaaaggcctcgccatggccatcccaccctcccattccccaccacggcccac
ccccaagcaggaggacccctgggtcggggcggcatggtggagcaggcggacccccccatg
ccctcagataagagggacccctatatggcggtgccctctcagacccagcaggacgccact
ggggttattcgtgagagttaccagaaggggcgtgaccaactggtccctgtcacactgctg
gccatcgctgtcatcttggccttcgccatgggcgccatcttatctggtatcctcgtgtac
tgtgtgtgtgactaccggcggcgagatgttgagctgaccaggcgtaaagacaaggaccac
gttcacgataggaggggatccatgaacagcgtgaccaagctgacgggtctgtttgagacc
ggggtcaaggacggtcacccagaggccatcctcaccccgcttatgcacaacggccgcctc
accaatggcaagatgctgatcaaagccgaccagcaccacctggaccttgccggcatgccc
actccagagtcaacccccatgcagcctaggcgcaagcccagctggggaagccgcgagtgg
gagaggaaccagaacctgatcaacgcctgcaccaaggacctgccgcccatgggctcccca
gtcatctcccctgacctggctctgagggcctccccgggccacatccccagtgtggtggtg
ctgcctcagcaccagcaccaaaaggcctaccagcatgagtacgtggagcagccccaccgc
agtgacctcagtcagatgagcctggatgaccagggggccacgctggagtacaaggccctg
aagagcccctgccacggccttaacctggtggagagcgacgggctgccgcctcgcgtgccc
cagagggaggcctccctcaccatcccccccgccgtgccgcagatgggaaagcggctggag
gtccactcctctgtctatggccacgagttcaagcgaggctacccgatgagcgcccagaaa
ggatctgccctcaaaaagcacaacaccaactcgtccaactcctcccacatgtccagaaac
cccagttttaaccgtgtggagatgccgccccccgccccacagagggtggactccatgcac
atgacttcccaggggatgtccctctcccgacaacccagcataagctcttacggttcgttg
ccccggaccggggtcaaacacctcaagcccgacgtcccgcctaaaccctctttagtgtcc
ctctcgacgaacgtcaagtccaatgactcctgcacataa
DBGET
integrated database retrieval system
