KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410626
Entry
139410626         CDS       T10872                                 
Name
(RefSeq) ataxin-2-like isoform X1
  KO
K23625  ataxin 2/2L
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocla03019]
    139410626
Messenger RNA biogenesis [BR:ocla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     139410626
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 139410626
NCBI-ProteinID: XP_071012051
LinkDB
Position
6:complement(12277869..12302416)
AA seq 1080 aa
MSMKQAGGNRKPGSGAASGAGGSGGRQNLGRGRHSAKGPSAAVVSNGVYANMRMVHVLTS
LVGTNCELKVKNGMVYDGVFKTYSPECDLVLDAANIKSPGPSVGLRQEDLVDSIIFKASD
VVVVHFRDVDFNYARKVSTDTDNFTDTAVGGRINGEHKEKDLEPWDGGRQQHMVSGSLES
LDTDVSNGWDPNDMFKYNEEQYGIKSTYDSSLSTYTVALERDNSEEFLKREARAAQLAEE
IEASSTYKSRVALENDERSEEEKYTAVVRGEREQHTLNREKYIPPGQRNREGMSWGAGRQ
NSPRLVQSSSGPPRPGLHDYTPSSGADQRVVNGGATSCPSPSSRYQSGPSPLPPRAATPT
RPPSRPPSRPSRPPSHPSAHGSPAPICTIPSRRMSSEGPPRMSPKTQRTPRTHRVPPGSR
VPPGVDFMPHNAPGEVPVPPATRSSSSGGTWSSVVSGAHRPRSPRQNSMGGASPGPSPQT
GSTPVEPVNTSMSASSPTASPAPNMAATSSAEAKDSRVQATRQNSPTVNKENMKPLESPP
SINRPLSKGPPSMAPDHRKQIDNLKKFSVDFRLQSSSNPDPQFQQMVTKPPQDTGEKSKQ
LPLDKGLEGSEGPVVPARSNKPDSPGASSPSLSSTLCPAPEQNRGPDVTSQGVQTSAPNL
SGGAKPEDKEEDEADQMRKSTLNPNAHEFKPRVFTPQPKPATTPTPPRPQGQPSPSIVMQ
QPQQVYFPQMYPLTPVSPGVQKSIIWKSPAMYHVQMPHMTLSQSKPYRPGKVSNMPQQRS
DQHHPQGTPTMMHPAAGPPIVAQSPAYSAQYFTCSPQQFTSQQLMPHYQSQAQHVFSPVI
QGQARMMAPPTHGHPGQLVSSTTQYGEQTHTMYVSQGPMPQQYAHPNTTLHPHPQPSATP
TGQSQQGVQHGGNHPAPSPVQQHQAAAAAQALHMGNQPQQQMYQALAPTPPSMTPGPNPQ
SPQGSFSSAQQAVYLHPQQMQHGYNPSHMAHMQQVSSTFRSPSLHSEYILYEQAHIQSGM
VPSHHGNPGHPQMMLMATQQQGGPQPQLAQNALNPIPVSSTAHFSYLAHPQVQQHHQQQL
NT seq 3243 nt   +upstreamnt  +downstreamnt
atgtcaatgaagcaggccggtggtaatcgcaaacccggcagtggcgctgcctctggtgcc
gggggaagtggcggacgacagaatttgggcaggggacggcatagtgccaaaggaccttca
gcagcagttgtctctaatggtgtatatgcaaacatgaggatggtccatgtcttgacatca
ttagtgggaaccaattgtgaactgaaagtaaaaaatggaatggtttatgatggagtgttt
aaaacatacagcccagagtgtgacctggttctggatgcggccaacatcaagagtcctggg
cccagtgtgggcctgcgacaggaagacctcgtggacagcattatcttcaaggcttccgat
gtggtggtggtgcacttcagagacgtggacttcaattatgccagaaaagtctctactgac
acagataacttcacggacactgcagtgggcggcagaatcaacggggaacacaaggagaag
gacctggagccgtgggatggagggcggcagcagcacatggtctcaggcagcctggagtct
ctggacacagacgtgtcaaatggctgggacccgaatgacatgttcaagtacaatgaagag
cagtatggcatcaagtccacctacgacagcagcctgtccacctacacggttgccctggag
cgggataactctgaggagtttctgaagcgggaagcgcgagcggcccaactggcggaggag
atcgaggccagctccacctacaagtcccgcgtggccctggagaatgacgagcgcagcgag
gaggagaagtacactgccgtggtgaggggagagagggagcaacacacactcaacagagaa
aagtacattcccccgggtcagaggaacagagaggggatgtcatggggagcgggtcgtcag
aactcccctaggttggtccagagcagcagtggacctccccggccaggtcttcacgactac
acccccagctctggagctgaccagagagttgtcaacggaggtgccacctcctgcccatcg
ccctcctcccgctaccagtcaggcccctcccctctcccacccagggcggccacgcccacc
cggcctccatccagacccccctcgcggccctcccggcccccgtctcacccctctgctcac
ggctctccagctcccatctgcactatacccagtagacgcatgtcctcagaaggccctccc
aggatgtccccaaagacccagcgtacccctcgcacccacagagttccccccgggagtaga
gttcccccgggagtagacttcatgccccacaatgctccaggagaggtgcccgttcccccg
gctacccgcagcagctcatccggtggcacctggtcttcagtggtcagcggagcacacaga
cctcgatcccctcggcagaacagcatgggcggggcctctcctggtccctcgccccagact
gggtccactcccgtggaacctgttaacacatcaatgtcagcttcctcacctactgctagc
cctgcccccaatatggccgccacctcctcagcagaggcgaaagattctcgggtccaggcg
acgagacagaactctcctacggtcaacaaagagaacatgaaacccctggagagcccccct
agtatcaacagaccactctctaaaggacccccctccatggcaccagaccacagaaaacaa
atagacaacttaaagaaatttagtgtagattttaggttgcagtccagctctaacccagac
ccacagtttcagcagatggtgactaagcctccgcaggacacgggagagaagtccaagcag
cttcctctggataaggggttggaggggtctgagggccctgtggtccccgccaggagcaac
aagccagacagccctggcgcatcatccccctccctgtcctctaccctctgtcccgccccg
gagcagaacagggggcctgacgtgacctcgcagggtgtccagacatctgcacccaactta
agcggaggagccaagcctgaagacaaggaagaggatgaggcagatcaaatgagaaagtcg
actctgaatcctaatgcccacgagttcaaacccagggtcttcactcctcagccaaagccg
gccaccaccccgaccccccctcgtccccaaggccagcccagcccctctatcgtcatgcag
cagcctcaacaggtctactttccccagatgtaccctctgacccctgtcagccctggagtc
cagaaaagcattatctggaagtctccagccatgtaccacgtccagatgcctcatatgacg
ctgagccagtccaagccctacagaccaggtaaagtatccaacatgccccagcagaggtca
gaccagcaccacccccagggcacgcccaccatgatgcacccggccgcggggccgcccatc
gtggcccagagccctgcctactcagcccagtacttcacgtgtagcccacagcagtttacc
agccagcaactgatgccccactaccagtcacaggcccagcatgtgttcagcccggtgatt
cagggtcaggccaggatgatggcccctcccacccacggccaccctggccagctggtctct
tccaccacccagtatggtgaacagactcacaccatgtacgtgtcacaaggccccatgccg
cagcagtacgcccaccccaataccacactgcatccccacccccagccctcggccaccccc
acaggccagtcccagcagggcgtgcagcacggtggcaaccacccggcccccagccccgtc
cagcagcaccaggctgctgcagctgcccaggccctgcacatgggcaaccagccccagcag
cagatgtaccaggccctggcccccaccccaccctccatgaccccggggcccaacccccag
tccccccagggcagcttctcctcggcccagcaggcagtctacctccacccccagcagatg
cagcacggctacaacccctcccacatggcccacatgcagcaggtgagctccaccttcaga
agcccttcccttcactctgagtacatactatatgagcaggcccatatccagtctgggatg
gtgccgtcccaccatggtaaccctggccaccctcagatgatgcttatggccacccagcag
caaggtggcccccagccccaactcgcccagaatgccctcaaccccatcccagtgtcctcc
actgctcacttctcttacttggctcacccccaagttcaacagcaccatcagcagcagctg
tag

DBGET integrated database retrieval system