Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410631
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Entry
139410631 CDS
T10872
Name
(RefSeq) ubiquilin-1-like
KO
K04523
ubiquilin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139410631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139410631
03051 Proteasome [BR:
ocla03051
]
139410631
Membrane trafficking [BR:
ocla04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
139410631
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
139410631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Ubiquitin_5
Rad60-SLD
UBA_7
YukD
Dsc3_N
UBA_HOIP
UN_NPL4
CUE
Rad60-SLD_2
Het-C
Motif
Other DBs
NCBI-GeneID:
139410631
NCBI-ProteinID:
XP_071012073
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All DBs
Position
6:complement(12576838..12591662)
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AA seq
565 aa
AA seq
DB search
MANTVDEDEQQPFLAECKIIRVTVKTPKEKEEIAIPENSSIKQFKEQIAQRFQAQTEQLV
LIFAGKILKDADLLSHQGIHNGLTVHLVIKTQSRPPELCASPSNTTASEQAQPEGPTSVP
GPPPVEPTSVPRPSPASSATPTFSLGLGSPGTAAAGPGLAELQRQLMSNPELLAQIMDSP
LVQGMLSNPDMMRQLIMANPQMQLLLQHNPSITHLFNNPDVMRQTLEIARNPTMMQEMLR
NQDRALSNNALRRMSTDAQGPMLNAAAQEPIAGNPFASLTTSSSGEIQSPRVENGDPLAN
PWVPPASTDTATPATTPTLSSNGPQTTLHNLGPAMGGRTSNSAAMSNSPGMQSLLQQITE
NPTLMHNMLSAPYMRSLLNSLSQNPDLAAQMMLNNPLFSGNPQLQQQMRQQLPMFLQQMQ
NPEMLSAMSNPRAMQALLQIQQGLQTLATEAPGFIPGVGLEGAGSDLNPAPGLSSDPAPS
DLSGGSQVVPETGQRQQQQQFVRQMLDALASTNQQAQTEELLFQEQVEQLTTMGFLNPEA
NLQALIATGGDVNAAVERLLDSPPL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggctaatactgtggatgaggacgagcaacaaccattccttgctgaatgtaagatcatc
agagttactgtgaaaacaccaaaggaaaaagaggaaatcgccattccagagaacagctcc
atcaaacagtttaaggagcagatagcccagcggttccaggcacaaacagagcagctggta
ctcatcttcgctgggaagatcctcaaagatgcagatctgctgagtcatcaaggcatccac
aacggactgaccgtccacctggtcatcaagacccagagcaggcctccggagttgtgtgcc
tctccttccaacaccactgcctcagaacaggcccaaccagaaggccctacctctgtccct
ggaccccctcctgtagaacctacctctgtccctcgaccctctcctgcttcttcagccacc
cctaccttcagccttggtctaggcagtccagggacagctgctgcggggcctggtctcgct
gagctgcagaggcagctgatgtccaaccctgagctgctggcccagattatggacagtccc
ttggtccagggcatgctgtccaacccagacatgatgagacagctcatcatggccaacccc
cagatgcagctgctactgcagcacaaccccagcatcacccacctgttcaacaaccctgac
gtcatgagacagaccctggagatagcacggaacccgaccatgatgcaggagatgttgcgc
aaccaggacagggcactaagcaacaatgccctccgcaggatgtccactgatgctcaggga
cccatgctgaatgctgctgctcaggaaccgattgcaggaaacccttttgcttctctgacg
acctcgtcatcaggggaaatccagtcaccccgggtggaaaatggagaccccctcgccaac
ccctgggttccccctgcttccacagacaccgccacacccgccactacccccaccctgtcc
agcaatggccctcagaccaccctgcacaacctaggtcccgccatgggaggtagaacatct
aacagtgcagctatgtccaatagtccgggaatgcagagtcttctgcagcagatcacggag
aaccccacactgatgcacaacatgctgtcagccccctacatgaggagcctactcaacagc
ctgagccagaaccctgacctagcagcacagatgatgctgaacaacccactgttttctggg
aaccctcaactgcagcagcaaatgagacaacaactcccaatgttcctccaacagatgcag
aaccctgagatgctgtcggccatgtccaaccccagggccatgcaggcactgctgcagatc
caacagggactgcagacccttgccactgaggcacctggattcataccaggggttggactg
gaaggcgctggctcagatcttaaccctgcccctggattgtcatcagaccccgcccctagt
gacctcagcggtgggtcccaggtagtcccggaaacgggtcagcggcaacaacaacaacag
tttgtgcgtcagatgctagacgctctcgctagcaccaatcagcaggctcagactgaagag
ctgctgttccaggagcaggtggagcagctgacgaccatgggcttcctcaacccagaggcc
aacctgcaggccctcatcgctaccgggggagacgtcaacgccgctgtagaacgactgctg
gactcgccacccttgtaa
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